Project name: IL-21 [mutate: QC19A] [mutate: SC70A]

Status: done

Started: 2024-06-19 10:56:10
Settings
Chain sequence(s) A: QGQDRHMIRMRQLIDIVDCLKNYVNDLVPEFLPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRLTCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues SC70A
Energy difference between WT (input) and mutated protein (by FoldX) -0.31778 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:31)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:34)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:39)
Show buried residues

Minimal score value
-4.0148
Maximal score value
0.1772
Average score
-1.4941
Total score value
-198.7089

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -2.3956
2 G A -2.4925
3 Q A -2.5255
4 D A -2.8574
5 R A -2.5932
6 H A 0.0000
7 M A -0.7728
8 I A 0.0011
9 R A -1.1377
10 M A 0.0000
11 R A -1.9910
12 Q A -1.7803
13 L A 0.0000
14 I A -2.1498
15 D A -2.7087
16 I A 0.0000
17 V A 0.0000
18 D A -2.0940
19 C A -1.0321
20 L A 0.0000
21 K A -2.5637
22 N A -1.9894
23 Y A -1.3462
24 V A -1.5162
25 N A -1.9009
26 D A -1.7297
27 L A 0.0000
28 V A -1.1927
29 P A -1.2321
30 E A -1.4164
31 F A 0.0234
32 L A 0.0000
33 P A -1.6978
34 A A 0.0000
35 P A 0.0000
36 E A -3.1036
37 D A -3.0474
38 V A -2.3615
39 E A -2.7601
40 T A -1.6596
41 N A -1.5492
42 C A 0.0000
43 E A 0.0000
44 W A 0.1772
45 S A -0.0423
46 A A 0.0000
47 F A 0.0000
48 S A -0.9774
49 C A 0.0000
50 F A 0.0000
51 Q A -2.3067
52 K A -2.4019
53 A A 0.0000
54 Q A -2.1445
55 L A 0.0000
56 K A -2.5472
57 S A -1.9125
58 A A -1.4804
59 N A -2.2094
60 T A -1.6240
61 G A -2.0908
62 N A -2.2836
63 N A -2.0333
64 E A -2.5716
65 R A -2.3464
66 I A -0.6872
67 I A 0.0000
68 N A -1.5426
69 V A -0.6197
70 C A -0.9009 mutated: SC70A
71 I A 0.0000
72 K A -2.4046
73 K A -2.5809
74 L A 0.0000
75 K A -3.2879
76 R A -3.8402
77 K A -3.0027
78 P A 0.0000
79 P A -1.4483
80 S A -1.2481
81 T A -1.6682
82 N A -2.1666
83 A A -1.8222
84 G A -2.4437
85 R A -3.7181
86 R A -4.0148
87 Q A -3.8700
88 K A -3.8232
89 H A -3.0870
90 R A -2.6633
91 L A -1.2831
92 T A -0.5574
93 C A -0.5060
94 P A -0.6021
95 S A -0.8353
96 C A -1.5075
97 D A -2.3297
98 S A -1.6716
99 Y A 0.0000
100 E A -2.5543
101 K A -1.5969
102 K A -1.1828
103 P A -0.7924
104 P A 0.0000
105 K A -2.8036
106 E A -2.2504
107 F A 0.0000
108 L A 0.0000
109 E A -3.0003
110 R A -2.4321
111 F A 0.0000
112 K A -2.0809
113 S A -1.7406
114 L A 0.0000
115 L A 0.0000
116 Q A -1.6140
117 K A -1.4461
118 M A 0.0000
119 I A 0.0000
120 H A -1.4747
121 Q A -1.4364
122 H A -1.1129
123 L A -0.8401
124 S A -1.3278
125 S A -1.7468
126 R A -2.6033
127 T A -1.9456
128 H A -2.6670
129 G A -2.7674
130 S A -2.6000
131 E A -3.4315
132 D A -3.0901
133 S A -1.6706
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Laboratory of Theory of Biopolymers 2018