| Chain sequence(s) |
A: FKGH
C: FKGH B: FKGH E: FKGH D: FKGH G: FKGH F: FKGH I: FKGH H: FKGH K: FKGH J: FKGH M: FKGH L: FKGH O: FKGH N: FKGH Q: FKGH P: FKGH S: FKGH R: FKGH T: FKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:26)
[INFO] Main: Simulation completed successfully. (00:04:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.1290 | |
| 2 | K | A | -0.9763 | |
| 3 | G | A | -0.7836 | |
| 4 | H | A | -1.8043 | |
| 1 | F | B | 2.3199 | |
| 2 | K | B | -0.4399 | |
| 3 | G | B | -0.5126 | |
| 4 | H | B | -2.0505 | |
| 1 | F | C | 2.5089 | |
| 2 | K | C | -0.2343 | |
| 3 | G | C | -0.6070 | |
| 4 | H | C | -1.7764 | |
| 1 | F | D | 2.4498 | |
| 2 | K | D | -0.4838 | |
| 3 | G | D | -1.0033 | |
| 4 | H | D | -1.8949 | |
| 1 | F | E | 2.0416 | |
| 2 | K | E | -0.6547 | |
| 3 | G | E | -1.4475 | |
| 4 | H | E | -2.2811 | |
| 1 | F | F | 2.3609 | |
| 2 | K | F | -0.1845 | |
| 3 | G | F | -0.9187 | |
| 4 | H | F | -1.4908 | |
| 1 | F | G | 2.6953 | |
| 2 | K | G | 0.1396 | |
| 3 | G | G | -0.7212 | |
| 4 | H | G | -1.9271 | |
| 1 | F | H | 3.1700 | |
| 2 | K | H | 0.3489 | |
| 3 | G | H | -0.6122 | |
| 4 | H | H | -1.8199 | |
| 1 | F | I | 2.8390 | |
| 2 | K | I | 0.1887 | |
| 3 | G | I | -0.7563 | |
| 4 | H | I | -1.9280 | |
| 1 | F | J | 2.1481 | |
| 2 | K | J | -0.3855 | |
| 3 | G | J | -1.2125 | |
| 4 | H | J | -2.3313 | |
| 1 | F | K | 1.1105 | |
| 2 | K | K | -1.6861 | |
| 3 | G | K | -1.7367 | |
| 4 | H | K | -2.0954 | |
| 1 | F | L | 1.4017 | |
| 2 | K | L | -1.2129 | |
| 3 | G | L | -1.4955 | |
| 4 | H | L | -2.0007 | |
| 1 | F | M | 1.0824 | |
| 2 | K | M | -1.9666 | |
| 3 | G | M | -2.2789 | |
| 4 | H | M | -2.7252 | |
| 1 | F | N | 1.4697 | |
| 2 | K | N | -0.8985 | |
| 3 | G | N | -1.5940 | |
| 4 | H | N | -2.4527 | |
| 1 | F | O | 2.4673 | |
| 2 | K | O | 0.0565 | |
| 3 | G | O | -0.7553 | |
| 4 | H | O | -1.6397 | |
| 1 | F | P | 2.0501 | |
| 2 | K | P | -0.2728 | |
| 3 | G | P | -1.0522 | |
| 4 | H | P | -2.0665 | |
| 1 | F | Q | 1.6485 | |
| 2 | K | Q | -1.0337 | |
| 3 | G | Q | -0.8451 | |
| 4 | H | Q | -1.5005 | |
| 1 | F | R | 1.7049 | |
| 2 | K | R | -1.1034 | |
| 3 | G | R | -1.3406 | |
| 4 | H | R | -1.7759 | |
| 1 | F | S | 1.5085 | |
| 2 | K | S | -1.2591 | |
| 3 | G | S | -1.5957 | |
| 4 | H | S | -1.8348 | |
| 1 | F | T | 1.0482 | |
| 2 | K | T | -1.5581 | |
| 3 | G | T | -1.3461 | |
| 4 | H | T | -1.5231 |