Project name: 7f8f2a8c372ce9f

Status: done

Started: 2026-05-21 12:36:04
Settings
Chain sequence(s) A: FKGH
C: FKGH
B: FKGH
E: FKGH
D: FKGH
G: FKGH
F: FKGH
I: FKGH
H: FKGH
K: FKGH
J: FKGH
M: FKGH
L: FKGH
O: FKGH
N: FKGH
Q: FKGH
P: FKGH
S: FKGH
R: FKGH
T: FKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:30)
Show buried residues

Minimal score value
-2.7252
Maximal score value
3.17
Average score
-0.4375
Total score value
-34.996

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 2.1290
2 K A -0.9763
3 G A -0.7836
4 H A -1.8043
1 F B 2.3199
2 K B -0.4399
3 G B -0.5126
4 H B -2.0505
1 F C 2.5089
2 K C -0.2343
3 G C -0.6070
4 H C -1.7764
1 F D 2.4498
2 K D -0.4838
3 G D -1.0033
4 H D -1.8949
1 F E 2.0416
2 K E -0.6547
3 G E -1.4475
4 H E -2.2811
1 F F 2.3609
2 K F -0.1845
3 G F -0.9187
4 H F -1.4908
1 F G 2.6953
2 K G 0.1396
3 G G -0.7212
4 H G -1.9271
1 F H 3.1700
2 K H 0.3489
3 G H -0.6122
4 H H -1.8199
1 F I 2.8390
2 K I 0.1887
3 G I -0.7563
4 H I -1.9280
1 F J 2.1481
2 K J -0.3855
3 G J -1.2125
4 H J -2.3313
1 F K 1.1105
2 K K -1.6861
3 G K -1.7367
4 H K -2.0954
1 F L 1.4017
2 K L -1.2129
3 G L -1.4955
4 H L -2.0007
1 F M 1.0824
2 K M -1.9666
3 G M -2.2789
4 H M -2.7252
1 F N 1.4697
2 K N -0.8985
3 G N -1.5940
4 H N -2.4527
1 F O 2.4673
2 K O 0.0565
3 G O -0.7553
4 H O -1.6397
1 F P 2.0501
2 K P -0.2728
3 G P -1.0522
4 H P -2.0665
1 F Q 1.6485
2 K Q -1.0337
3 G Q -0.8451
4 H Q -1.5005
1 F R 1.7049
2 K R -1.1034
3 G R -1.3406
4 H R -1.7759
1 F S 1.5085
2 K S -1.2591
3 G S -1.5957
4 H S -1.8348
1 F T 1.0482
2 K T -1.5581
3 G T -1.3461
4 H T -1.5231
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Laboratory of Theory of Biopolymers 2018