| Chain sequence(s) |
A: MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:17)
[INFO] Main: Simulation completed successfully. (00:06:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.2232 | |
| 2 | S | A | -1.4568 | |
| 3 | E | A | -1.9358 | |
| 4 | Y | A | -0.5012 | |
| 5 | I | A | 0.0000 | |
| 6 | R | A | -1.5291 | |
| 7 | V | A | 0.0000 | |
| 8 | T | A | 0.0000 | |
| 9 | E | A | -3.6431 | |
| 10 | D | A | -4.6631 | |
| 11 | E | A | -4.5232 | |
| 12 | N | A | -4.2119 | |
| 13 | D | A | -4.6285 | |
| 14 | E | A | -3.7445 | |
| 15 | P | A | -2.4583 | |
| 16 | I | A | -0.9363 | |
| 17 | E | A | -1.7616 | |
| 18 | I | A | 0.0000 | |
| 19 | P | A | -1.0554 | |
| 20 | S | A | 0.0000 | |
| 21 | E | A | -2.7883 | |
| 22 | D | A | -3.3830 | |
| 23 | D | A | -3.2420 | |
| 24 | G | A | -2.2147 | |
| 25 | T | A | -1.4257 | |
| 26 | V | A | 0.0000 | |
| 27 | L | A | 0.3108 | |
| 28 | L | A | 0.4901 | |
| 29 | S | A | -0.0657 | |
| 30 | T | A | -0.0726 | |
| 31 | V | A | 0.0000 | |
| 32 | T | A | -0.4122 | |
| 33 | A | A | -0.5141 | |
| 34 | Q | A | -1.1395 | |
| 35 | F | A | 0.0000 | |
| 36 | P | A | -0.6220 | |
| 37 | G | A | -0.6390 | |
| 38 | A | A | 0.0000 | |
| 39 | C | A | -0.0695 | |
| 40 | G | A | 0.0000 | |
| 41 | L | A | 0.0000 | |
| 42 | R | A | -1.6473 | |
| 43 | Y | A | 0.0000 | |
| 44 | R | A | -2.1522 | |
| 45 | N | A | -1.0814 | |
| 46 | P | A | -0.1609 | |
| 47 | V | A | 1.0446 | |
| 48 | S | A | -0.0825 | |
| 49 | Q | A | -1.0818 | |
| 50 | C | A | -0.3619 | |
| 51 | M | A | -1.0171 | |
| 52 | R | A | -1.9558 | |
| 53 | G | A | -1.6976 | |
| 54 | V | A | -1.2063 | |
| 55 | R | A | -1.5319 | |
| 56 | L | A | 0.0406 | |
| 57 | V | A | 0.2255 | |
| 58 | E | A | -0.9584 | |
| 59 | G | A | -0.2558 | |
| 60 | I | A | 0.4111 | |
| 61 | L | A | 0.0000 | |
| 62 | H | A | -0.8223 | |
| 63 | A | A | -1.1020 | |
| 64 | P | A | -1.5771 | |
| 65 | D | A | -1.8790 | |
| 66 | A | A | -0.9968 | |
| 67 | G | A | -1.2308 | |
| 68 | W | A | 0.0000 | |
| 69 | G | A | -1.1229 | |
| 70 | N | A | -1.2564 | |
| 71 | L | A | -0.7527 | |
| 72 | V | A | -1.1021 | |
| 73 | Y | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | N | A | -1.2748 | |
| 77 | Y | A | -0.9076 | |
| 78 | P | A | -1.6453 | |
| 79 | K | A | -3.2934 | |
| 80 | D | A | -3.9905 | |
| 81 | N | A | -4.2003 | |
| 82 | K | A | -4.3986 | |
| 83 | R | A | -4.0172 | |
| 84 | K | A | -3.4099 | |
| 85 | M | A | -1.7329 | |
| 86 | D | A | -2.8354 | |
| 87 | E | A | -3.1054 | |
| 88 | T | A | -2.2909 | |
| 89 | D | A | -2.2776 | |
| 90 | A | A | -1.1758 | |
| 91 | S | A | -0.5232 | |
| 92 | S | A | -0.3431 | |
| 93 | A | A | 0.5159 | |
| 94 | V | A | 1.1353 | |
| 95 | K | A | -0.7261 | |
| 96 | V | A | 0.1039 | |
| 97 | K | A | -1.5947 | |
| 98 | R | A | -2.0664 | |
| 99 | A | A | -0.8285 | |
| 100 | V | A | -0.2277 | |
| 101 | Q | A | -1.6390 | |
| 102 | K | A | -1.8241 | |
| 103 | T | A | -1.0701 | |
| 104 | S | A | -1.1486 | |
| 105 | D | A | -0.4306 | |
| 106 | L | A | 0.0000 | |
| 107 | I | A | -0.1441 | |
| 108 | V | A | 0.0000 | |
| 109 | L | A | 0.2099 | |
| 110 | G | A | 0.0056 | |
| 111 | L | A | 0.0000 | |
| 112 | P | A | -0.6807 | |
| 113 | W | A | -0.5741 | |
| 114 | K | A | -1.5592 | |
| 115 | T | A | 0.0000 | |
| 116 | T | A | -2.0684 | |
| 117 | E | A | -2.4493 | |
| 118 | Q | A | -2.9461 | |
| 119 | D | A | -2.9578 | |
| 120 | L | A | 0.0000 | |
| 121 | K | A | -2.8654 | |
| 122 | E | A | -2.8577 | |
| 123 | Y | A | -1.3949 | |
| 124 | F | A | 0.0000 | |
| 125 | S | A | -1.1770 | |
| 126 | T | A | -0.5251 | |
| 127 | F | A | -0.3183 | |
| 128 | G | A | -0.9264 | |
| 129 | E | A | -1.6713 | |
| 130 | V | A | -0.5356 | |
| 131 | L | A | 0.8692 | |
| 132 | M | A | 0.3117 | |
| 133 | V | A | -0.7114 | |
| 134 | Q | A | -1.3399 | |
| 135 | V | A | 0.0000 | |
| 136 | K | A | -2.1715 | |
| 137 | K | A | -2.7797 | |
| 138 | D | A | -1.8240 | |
| 139 | L | A | -0.3168 | |
| 140 | K | A | -1.4830 | |
| 141 | T | A | -1.3667 | |
| 142 | G | A | -1.4534 | |
| 143 | H | A | -2.0796 | |
| 144 | S | A | -1.9573 | |
| 145 | K | A | -2.2322 | |
| 146 | G | A | -1.0462 | |
| 147 | F | A | -0.2363 | |
| 148 | G | A | 0.0000 | |
| 149 | F | A | -0.1104 | |
| 150 | V | A | 0.0000 | |
| 151 | R | A | -0.5348 | |
| 152 | F | A | 0.0000 | |
| 153 | T | A | -1.0121 | |
| 154 | E | A | -1.5104 | |
| 155 | Y | A | -1.1360 | |
| 156 | E | A | -1.5715 | |
| 157 | T | A | -1.1512 | |
| 158 | Q | A | 0.0000 | |
| 159 | V | A | -0.0949 | |
| 160 | K | A | -1.3652 | |
| 161 | V | A | 0.0000 | |
| 162 | M | A | -0.8223 | |
| 163 | S | A | -1.1970 | |
| 164 | Q | A | -1.8921 | |
| 165 | R | A | -1.9832 | |
| 166 | H | A | 0.0000 | |
| 167 | M | A | -0.3980 | |
| 168 | I | A | 0.0000 | |
| 169 | D | A | -1.6308 | |
| 170 | G | A | -1.2001 | |
| 171 | R | A | -1.2139 | |
| 172 | W | A | -0.2470 | |
| 173 | C | A | 0.0000 | |
| 174 | D | A | -1.0494 | |
| 175 | C | A | 0.0000 | |
| 176 | K | A | -1.1106 | |
| 177 | L | A | -1.1641 | |
| 178 | P | A | 0.0000 | |
| 179 | N | A | -2.3884 | |
| 180 | S | A | -1.9028 | |
| 181 | K | A | -2.5842 | |
| 182 | Q | A | -3.1229 | |
| 183 | S | A | -3.0916 | |
| 184 | Q | A | -3.2354 | |
| 185 | D | A | -3.3667 | |
| 186 | E | A | -3.3027 | |
| 187 | P | A | -1.9324 | |
| 188 | L | A | -0.8023 | |
| 189 | R | A | -2.5064 | |
| 190 | S | A | -2.3165 | |
| 191 | R | A | -2.7067 | |
| 192 | K | A | -2.2644 | |
| 193 | V | A | 0.0000 | |
| 194 | F | A | 0.2759 | |
| 195 | V | A | 0.0000 | |
| 196 | G | A | 0.0000 | |
| 197 | R | A | -2.2754 | |
| 198 | C | A | 0.0000 | |
| 199 | T | A | -2.1436 | |
| 200 | E | A | -3.0426 | |
| 201 | D | A | -2.9560 | |
| 202 | M | A | 0.0000 | |
| 203 | T | A | -2.0946 | |
| 204 | E | A | -2.0948 | |
| 205 | D | A | -3.3911 | |
| 206 | E | A | -3.1418 | |
| 207 | L | A | 0.0000 | |
| 208 | R | A | -3.6287 | |
| 209 | E | A | -3.5888 | |
| 210 | F | A | -1.7813 | |
| 211 | F | A | 0.0000 | |
| 212 | S | A | -2.0527 | |
| 213 | Q | A | -1.8528 | |
| 214 | Y | A | -0.6554 | |
| 215 | G | A | -1.1895 | |
| 216 | D | A | -2.3531 | |
| 217 | V | A | -1.7343 | |
| 218 | M | A | -0.7511 | |
| 219 | D | A | -1.7078 | |
| 220 | V | A | 0.0000 | |
| 221 | F | A | 0.8413 | |
| 222 | I | A | 0.0000 | |
| 223 | P | A | -0.6976 | |
| 224 | K | A | -1.8930 | |
| 225 | P | A | -1.7567 | |
| 226 | F | A | -1.6572 | |
| 227 | R | A | -2.4268 | |
| 228 | A | A | -1.5744 | |
| 229 | F | A | -0.4301 | |
| 230 | A | A | 0.0000 | |
| 231 | F | A | 0.6832 | |
| 232 | V | A | 0.0000 | |
| 233 | T | A | -1.1937 | |
| 234 | F | A | 0.0000 | |
| 235 | A | A | -1.4686 | |
| 236 | D | A | -2.4021 | |
| 237 | D | A | -2.4997 | |
| 238 | Q | A | -2.4100 | |
| 239 | I | A | -1.5192 | |
| 240 | A | A | 0.0000 | |
| 241 | Q | A | -2.6368 | |
| 242 | S | A | -1.1758 | |
| 243 | L | A | 0.0000 | |
| 244 | C | A | -1.4989 | |
| 245 | G | A | -1.7795 | |
| 246 | E | A | -2.2656 | |
| 247 | D | A | -1.7906 | |
| 248 | L | A | -0.0588 | |
| 249 | I | A | 1.2961 | |
| 250 | I | A | 0.0000 | |
| 251 | K | A | -1.4745 | |
| 252 | G | A | -0.3395 | |
| 253 | I | A | 0.1034 | |
| 254 | S | A | -0.1734 | |
| 255 | V | A | 0.0000 | |
| 256 | H | A | -1.3473 | |
| 257 | I | A | 0.0000 | |
| 258 | S | A | -1.2706 | |
| 259 | N | A | -1.8399 | |
| 260 | A | A | 0.0000 | |
| 261 | E | A | -2.6386 | |
| 262 | P | A | -2.5726 | |
| 263 | K | A | -3.2254 | |
| 264 | H | A | -3.2485 | |
| 265 | N | A | -3.3986 | |
| 266 | S | A | -2.6652 | |
| 267 | N | A | -3.0567 | |
| 268 | R | A | -3.7817 | |
| 269 | Q | A | -2.9796 | |
| 270 | L | A | -1.4277 | |
| 271 | E | A | -3.3238 | |
| 272 | R | A | -3.2726 | |
| 273 | S | A | -1.8694 | |
| 274 | G | A | -1.8110 | |
| 275 | R | A | -1.9451 | |
| 276 | F | A | 0.2063 | |
| 277 | G | A | -0.6252 | |
| 278 | G | A | -1.1406 | |
| 279 | N | A | -1.6786 | |
| 280 | P | A | -1.3523 | |
| 281 | G | A | -0.7557 | |
| 282 | G | A | -0.0599 | |
| 283 | F | A | 1.1174 | |
| 284 | G | A | -0.5041 | |
| 285 | N | A | -1.7880 | |
| 286 | Q | A | -2.2562 | |
| 287 | G | A | -1.1925 | |
| 288 | G | A | -0.0971 | |
| 289 | F | A | 1.0814 | |
| 290 | G | A | -0.1815 | |
| 291 | N | A | -1.5679 | |
| 292 | S | A | -1.9304 | |
| 293 | R | A | -2.5771 | |
| 294 | G | A | -1.8736 | |
| 295 | G | A | -1.3611 | |
| 296 | G | A | -0.8739 | |
| 297 | A | A | -0.1479 | |
| 298 | G | A | 0.0914 | |
| 299 | L | A | 0.8352 | |
| 300 | G | A | -0.7144 | |
| 301 | N | A | -2.0473 | |
| 302 | N | A | -2.6879 | |
| 303 | Q | A | -2.3644 | |
| 304 | G | A | -1.8026 | |
| 305 | S | A | -1.1475 | |
| 306 | N | A | -1.0627 | |
| 307 | M | A | 0.0180 | |
| 308 | G | A | -0.4395 | |
| 309 | G | A | -0.6009 | |
| 310 | G | A | -0.2838 | |
| 311 | M | A | 0.5093 | |
| 312 | N | A | -0.1184 | |
| 313 | F | A | 1.6038 | |
| 314 | G | A | 0.7423 | |
| 315 | A | A | 1.1329 | |
| 316 | F | A | 2.1354 | |
| 317 | S | A | 0.7965 | |
| 318 | I | A | 1.0734 | |
| 319 | N | A | -0.1119 | |
| 320 | P | A | 0.0236 | |
| 321 | A | A | 0.4215 | |
| 322 | M | A | 0.9144 | |
| 323 | M | A | 0.8375 | |
| 324 | A | A | 0.1976 | |
| 325 | A | A | 0.4728 | |
| 326 | A | A | 0.2320 | |
| 327 | Q | A | -0.6310 | |
| 328 | A | A | -0.3852 | |
| 329 | A | A | 0.0010 | |
| 330 | L | A | 0.4265 | |
| 331 | Q | A | -0.7109 | |
| 332 | S | A | -0.1756 | |
| 333 | S | A | 0.4651 | |
| 334 | W | A | 0.9054 | |
| 335 | G | A | 0.5617 | |
| 336 | M | A | 1.7596 | |
| 337 | M | A | 2.0872 | |
| 338 | G | A | 1.3032 | |
| 339 | M | A | 1.8869 | |
| 340 | L | A | 1.9439 | |
| 341 | A | A | 0.3527 | |
| 342 | S | A | -0.6918 | |
| 343 | Q | A | -1.8713 | |
| 344 | Q | A | -2.5599 | |
| 345 | N | A | -2.8750 | |
| 346 | Q | A | -2.5014 | |
| 347 | S | A | -1.5211 | |
| 348 | G | A | -1.2600 | |
| 349 | P | A | -0.9216 | |
| 350 | S | A | -0.9639 | |
| 351 | G | A | -1.5617 | |
| 352 | N | A | -2.4342 | |
| 353 | N | A | -2.8478 | |
| 354 | Q | A | -3.0055 | |
| 355 | N | A | -2.8296 | |
| 356 | Q | A | -2.5941 | |
| 357 | G | A | -1.7606 | |
| 358 | N | A | -1.5236 | |
| 359 | M | A | -0.6492 | |
| 360 | Q | A | -2.2614 | |
| 361 | R | A | -3.1910 | |
| 362 | E | A | -3.3652 | |
| 363 | P | A | -2.4879 | |
| 364 | N | A | -2.3514 | |
| 365 | Q | A | -1.4525 | |
| 366 | A | A | 0.0310 | |
| 367 | F | A | 1.4557 | |
| 368 | G | A | 0.1410 | |
| 369 | S | A | -0.5530 | |
| 370 | G | A | -1.6529 | |
| 371 | N | A | -2.2899 | |
| 372 | N | A | -1.8393 | |
| 373 | S | A | -0.6194 | |
| 374 | Y | A | 0.6616 | |
| 375 | S | A | -0.0955 | |
| 376 | G | A | -0.6915 | |
| 377 | S | A | -1.1878 | |
| 378 | N | A | -1.7392 | |
| 379 | S | A | -1.2132 | |
| 380 | G | A | -0.8583 | |
| 381 | A | A | 0.2453 | |
| 382 | A | A | 0.8772 | |
| 383 | I | A | 2.0743 | |
| 384 | G | A | 0.9899 | |
| 385 | W | A | 1.1106 | |
| 386 | G | A | -0.0890 | |
| 387 | S | A | -0.2058 | |
| 388 | A | A | -0.5292 | |
| 389 | S | A | -0.8733 | |
| 390 | N | A | -1.4363 | |
| 391 | A | A | -0.8929 | |
| 392 | G | A | -0.9119 | |
| 393 | S | A | -0.7322 | |
| 394 | G | A | -0.8896 | |
| 395 | S | A | -0.4753 | |
| 396 | G | A | -0.0412 | |
| 397 | F | A | 0.9471 | |
| 398 | N | A | -0.7970 | |
| 399 | G | A | -0.5395 | |
| 400 | G | A | -0.2331 | |
| 401 | F | A | 1.2987 | |
| 402 | G | A | 0.3471 | |
| 403 | S | A | 0.1016 | |
| 404 | S | A | -0.2842 | |
| 405 | M | A | -0.0253 | |
| 406 | D | A | -1.8172 | |
| 407 | S | A | -1.7319 | |
| 408 | K | A | -2.4124 | |
| 409 | S | A | -1.3358 | |
| 410 | S | A | -0.6994 | |
| 411 | G | A | -0.3441 | |
| 412 | W | A | 0.9185 | |
| 413 | G | A | 0.5155 | |
| 414 | M | A | 1.0865 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine