Project name: PDE8B_shortest

Status: done

Started: 2026-07-29 08:17:36
Settings
Chain sequence(s) A: MGCAPSIHVSQSGVIYCRDSDESSSP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:07)
Show buried residues

Minimal score value
-3.1448
Maximal score value
4.0681
Average score
0.2065
Total score value
5.3678

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.2219
2 G A -0.1762
3 C A 0.4934
4 A A 0.2719
5 P A 0.0113
6 S A 0.0168
7 I A 1.9442
8 H A 1.9964
9 V A 3.1070
10 S A 1.1045
11 Q A -0.5567
12 S A 0.0744
13 G A 0.9618
14 V A 2.9214
15 I A 4.0681
16 Y A 3.1206
17 C A 1.5707
18 R A -0.8804
19 D A -1.8449
20 S A -2.1829
21 D A -3.0645
22 E A -3.1448
23 S A -1.7513
24 S A -1.4265
25 S A -0.8367
26 P A -0.6517
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Laboratory of Theory of Biopolymers 2018