Project name: 7fcac9bb1c6c8ca

Status: done

Started: 2026-02-11 10:37:53
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Chain sequence(s) A: GHKGHKG
C: GHKGHKG
B: GHKGHKG
E: GHKGHKG
D: GHKGHKG
G: GHKGHKG
F: GHKGHKG
I: GHKGHKG
H: GHKGHKG
K: GHKGHKG
J: GHKGHKG
L: GHKGHKG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:06)
Show buried residues

Minimal score value
-3.4839
Maximal score value
0.0
Average score
-2.2365
Total score value
-187.8688

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.7859
2 H A -2.3583
3 K A -2.5142
4 G A -2.1423
5 H A 0.0000
6 K A -3.1823
7 G A -2.5831
1 G B -1.6230
2 H B -2.7968
3 K B -3.4839
4 G B -2.8897
5 H B -3.2170
6 K B -3.1551
7 G B -2.3062
1 G C -1.4731
2 H C -2.3790
3 K C -2.4355
4 G C -2.1383
5 H C -2.5444
6 K C -3.1422
7 G C -3.1116
1 G D -1.8469
2 H D -2.5318
3 K D -3.0193
4 G D -2.7871
5 H D 0.0000
6 K D -2.9185
7 G D 0.0000
1 G E -1.6466
2 H E -2.0582
3 K E -2.2631
4 G E -1.9709
5 H E 0.0000
6 K E -2.7924
7 G E -2.1516
1 G F -1.5646
2 H F -1.9652
3 K F -2.0253
4 G F -1.9042
5 H F 0.0000
6 K F -3.0479
7 G F -2.4890
1 G G -1.6932
2 H G -2.1409
3 K G -2.4547
4 G G -2.1899
5 H G 0.0000
6 K G -3.0009
7 G G -2.5572
1 G H -1.9947
2 H H -2.8003
3 K H -3.1099
4 G H -2.8250
5 H H -3.0442
6 K H -3.3611
7 G H -2.6503
1 G I -1.8445
2 H I -2.6788
3 K I -3.3406
4 G I -2.8220
5 H I -3.3706
6 K I -3.1037
7 G I -2.1837
1 G J -1.8954
2 H J -2.7400
3 K J -3.4406
4 G J -2.4741
5 H J -2.5744
6 K J -2.7950
7 G J -2.3575
1 G K -2.0437
2 H K -2.9192
3 K K -3.0542
4 G K -2.4123
5 H K 0.0000
6 K K -2.5291
7 G K 0.0000
1 G L -1.7353
2 H L -2.1583
3 K L -2.3888
4 G L -1.8961
5 H L 0.0000
6 K L -2.8992
7 G L -2.1449
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Laboratory of Theory of Biopolymers 2018