| Chain sequence(s) |
A: QVQLQESGGGLVQPGGSLRLSCAASGRIPFITAMGWYRQAPGRQRELLATVTNSGSTNYADSVKGRFTISRDNAKNTVSLQMNSLKAEDTAVYYCNVRRLGNLSDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:31)
[INFO] Main: Simulation completed successfully. (00:01:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.6868 | |
| 2 | V | A | -1.2204 | |
| 3 | Q | A | -1.9217 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.6653 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.1176 | |
| 8 | G | A | -1.0334 | |
| 9 | G | A | -0.8081 | |
| 10 | G | A | -0.0567 | |
| 11 | L | A | 0.9967 | |
| 12 | V | A | 0.0288 | |
| 13 | Q | A | -1.2313 | |
| 14 | P | A | -1.3444 | |
| 15 | G | A | -1.2111 | |
| 16 | G | A | -0.7973 | |
| 17 | S | A | -1.1971 | |
| 18 | L | A | -0.9509 | |
| 19 | R | A | -2.2831 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.9737 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.2675 | |
| 24 | A | A | -1.2979 | |
| 25 | S | A | -1.7455 | |
| 26 | G | A | -1.8982 | |
| 27 | R | A | -2.0899 | |
| 28 | I | A | 0.0000 | |
| 29 | P | A | 0.4003 | |
| 30 | F | A | 1.6381 | |
| 31 | I | A | 0.0000 | |
| 32 | T | A | -0.0995 | |
| 33 | A | A | -0.5729 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.4407 | |
| 38 | R | A | -1.3194 | |
| 39 | Q | A | -2.1948 | |
| 40 | A | A | -1.9451 | |
| 41 | P | A | -1.4595 | |
| 42 | G | A | -1.9716 | |
| 43 | R | A | -3.3345 | |
| 44 | Q | A | -3.2547 | |
| 45 | R | A | -2.9749 | |
| 46 | E | A | -1.8337 | |
| 47 | L | A | -0.4950 | |
| 48 | L | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | -0.4750 | |
| 51 | V | A | 0.0000 | |
| 52 | T | A | -1.2947 | |
| 53 | N | A | -1.4150 | |
| 54 | S | A | -1.1189 | |
| 55 | G | A | -1.3898 | |
| 56 | S | A | -1.0011 | |
| 57 | T | A | -1.0389 | |
| 58 | N | A | -1.6614 | |
| 59 | Y | A | -1.4009 | |
| 60 | A | A | -1.5521 | |
| 61 | D | A | -2.5507 | |
| 62 | S | A | -1.7540 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.7481 | |
| 65 | G | A | -1.7349 | |
| 66 | R | A | -1.3490 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.1481 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.8293 | |
| 71 | R | A | -1.5883 | |
| 72 | D | A | -2.2609 | |
| 73 | N | A | -2.6250 | |
| 74 | A | A | -1.7665 | |
| 75 | K | A | -2.5600 | |
| 76 | N | A | -2.1485 | |
| 77 | T | A | -1.5739 | |
| 78 | V | A | 0.0000 | |
| 79 | S | A | -0.9183 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.6099 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.3178 | |
| 84 | S | A | -1.0439 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -1.7393 | |
| 87 | A | A | -1.4748 | |
| 88 | E | A | -2.0664 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.8131 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.7111 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.5798 | |
| 95 | C | A | 0.0000 | |
| 96 | N | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | R | A | -0.8685 | |
| 99 | R | A | -0.0088 | |
| 100 | L | A | 1.3418 | |
| 101 | G | A | 0.1327 | |
| 102 | N | A | -0.4703 | |
| 103 | L | A | 0.7331 | |
| 104 | S | A | -0.1172 | |
| 105 | D | A | -0.5602 | |
| 106 | Y | A | -0.0489 | |
| 107 | W | A | -0.2569 | |
| 108 | G | A | -0.8596 | |
| 109 | Q | A | -1.4692 | |
| 110 | G | A | -1.0168 | |
| 111 | T | A | 0.0000 | |
| 112 | Q | A | -1.0764 | |
| 113 | V | A | 0.0000 | |
| 114 | T | A | -0.2385 | |
| 115 | V | A | 0.0000 | |
| 116 | S | A | -0.6231 | |
| 117 | S | A | -0.4746 |