| Chain sequence(s) |
B: MAFMDELMARLKALKAVLEKLEELLSPEQAAKAREKFAEIEAKVEEIMAS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:54)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 1.1466 | |
| 2 | A | B | 0.6295 | |
| 3 | F | B | 1.4736 | |
| 4 | M | B | 0.2258 | |
| 5 | D | B | -1.4727 | |
| 6 | E | B | -1.7276 | |
| 7 | L | B | -1.1162 | |
| 8 | M | B | -1.6585 | |
| 9 | A | B | -1.8955 | |
| 10 | R | B | -2.5722 | |
| 11 | L | B | 0.0000 | |
| 12 | K | B | -2.0895 | |
| 13 | A | B | -0.8331 | |
| 14 | L | B | -0.0533 | |
| 15 | K | B | -1.4121 | |
| 16 | A | B | -0.7512 | |
| 17 | V | B | 0.3900 | |
| 18 | L | B | -0.8496 | |
| 19 | E | B | -2.1897 | |
| 20 | K | B | -1.9161 | |
| 21 | L | B | -0.6145 | |
| 22 | E | B | -2.1826 | |
| 23 | E | B | -1.8765 | |
| 24 | L | B | 0.2487 | |
| 25 | L | B | -0.3713 | |
| 26 | S | B | -1.0978 | |
| 27 | P | B | -1.8018 | |
| 28 | E | B | -3.0997 | |
| 29 | Q | B | -2.7921 | |
| 30 | A | B | 0.0000 | |
| 31 | A | B | -3.2803 | |
| 32 | K | B | -4.3220 | |
| 33 | A | B | -3.6803 | |
| 34 | R | B | -4.7097 | |
| 35 | E | B | -4.7280 | |
| 36 | K | B | -4.2175 | |
| 37 | F | B | 0.0000 | |
| 38 | A | B | -3.1782 | |
| 39 | E | B | -3.6896 | |
| 40 | I | B | -2.5312 | |
| 41 | E | B | -3.1143 | |
| 42 | A | B | -2.7522 | |
| 43 | K | B | -3.0174 | |
| 44 | V | B | 0.0000 | |
| 45 | E | B | -3.0821 | |
| 46 | E | B | -2.8270 | |
| 47 | I | B | -0.9098 | |
| 48 | M | B | -0.7261 | |
| 49 | A | B | -0.9033 | |
| 50 | S | B | -0.5167 |