| Chain sequence(s) |
A: VQIVYKGGGGSGGGGSVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFSGGGGSGFLGGRMKQIEDKIEEILSKIYHIENEIARIKKLIGER
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:37)
[INFO] Main: Simulation completed successfully. (00:01:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.9299 | |
| 2 | Q | A | 1.3344 | |
| 3 | I | A | 2.9212 | |
| 4 | V | A | 2.8099 | |
| 5 | Y | A | 1.3869 | |
| 6 | K | A | -0.9790 | |
| 7 | G | A | -1.2374 | |
| 8 | G | A | -1.5683 | |
| 9 | G | A | -1.5097 | |
| 10 | G | A | -1.2745 | |
| 11 | S | A | -1.0789 | |
| 12 | G | A | -1.1327 | |
| 13 | G | A | -1.3290 | |
| 14 | G | A | -1.0277 | |
| 15 | G | A | -0.9172 | |
| 16 | S | A | 0.1752 | |
| 17 | V | A | 0.6366 | |
| 18 | I | A | 0.8747 | |
| 19 | C | A | 0.0000 | |
| 20 | D | A | -1.8060 | |
| 21 | G | A | -1.0022 | |
| 22 | C | A | -0.1645 | |
| 23 | N | A | -1.2885 | |
| 24 | G | A | -0.2010 | |
| 25 | P | A | 0.4846 | |
| 26 | V | A | 1.2273 | |
| 27 | V | A | 2.0681 | |
| 28 | G | A | 0.7197 | |
| 29 | T | A | 0.4412 | |
| 30 | R | A | 0.3516 | |
| 31 | Y | A | 0.0411 | |
| 32 | K | A | -0.0719 | |
| 33 | C | A | 0.0000 | |
| 34 | S | A | 0.4501 | |
| 35 | V | A | 1.2999 | |
| 36 | C | A | 0.3850 | |
| 37 | P | A | -0.3687 | |
| 38 | D | A | -1.4774 | |
| 39 | Y | A | -0.5953 | |
| 40 | D | A | 0.0000 | |
| 41 | L | A | 0.0000 | |
| 42 | C | A | 0.0000 | |
| 43 | S | A | 0.3774 | |
| 44 | V | A | 1.2256 | |
| 45 | C | A | 0.0000 | |
| 46 | E | A | -1.1197 | |
| 47 | G | A | -0.8979 | |
| 48 | K | A | -1.8360 | |
| 49 | G | A | -1.4347 | |
| 50 | L | A | -1.1131 | |
| 51 | H | A | -1.5968 | |
| 52 | R | A | -2.5622 | |
| 53 | G | A | -1.5017 | |
| 54 | H | A | -0.9784 | |
| 55 | T | A | -0.5029 | |
| 56 | K | A | -0.3725 | |
| 57 | L | A | 0.4961 | |
| 58 | A | A | 0.4877 | |
| 59 | F | A | 0.6507 | |
| 60 | P | A | 0.3733 | |
| 61 | S | A | 0.4116 | |
| 62 | P | A | 0.3840 | |
| 63 | F | A | 1.6069 | |
| 64 | G | A | 0.0538 | |
| 65 | H | A | -0.6009 | |
| 66 | L | A | 0.5620 | |
| 67 | S | A | -0.4993 | |
| 68 | E | A | -1.5631 | |
| 69 | G | A | -0.5242 | |
| 70 | F | A | 0.9748 | |
| 71 | S | A | 0.0273 | |
| 72 | G | A | -0.6155 | |
| 73 | G | A | -1.1340 | |
| 74 | G | A | -1.1151 | |
| 75 | G | A | -0.9034 | |
| 76 | S | A | -0.2636 | |
| 77 | G | A | 0.0217 | |
| 78 | F | A | 1.4581 | |
| 79 | L | A | 0.3557 | |
| 80 | G | A | -0.6958 | |
| 81 | G | A | -1.5037 | |
| 82 | R | A | -2.5024 | |
| 83 | M | A | -1.8724 | |
| 84 | K | A | -3.5553 | |
| 85 | Q | A | -3.5121 | |
| 86 | I | A | -2.5444 | |
| 87 | E | A | -3.8703 | |
| 88 | D | A | -4.4052 | |
| 89 | K | A | -3.0723 | |
| 90 | I | A | -1.6869 | |
| 91 | E | A | -2.9721 | |
| 92 | E | A | -2.7842 | |
| 93 | I | A | -0.2357 | |
| 94 | L | A | 0.1819 | |
| 95 | S | A | -0.6506 | |
| 96 | K | A | -1.0002 | |
| 97 | I | A | 0.3757 | |
| 98 | Y | A | 0.5752 | |
| 99 | H | A | -0.8327 | |
| 100 | I | A | -0.1007 | |
| 101 | E | A | -1.6488 | |
| 102 | N | A | -2.4752 | |
| 103 | E | A | -2.2574 | |
| 104 | I | A | -0.8171 | |
| 105 | A | A | -1.9677 | |
| 106 | R | A | -2.2248 | |
| 107 | I | A | -0.1971 | |
| 108 | K | A | -1.6707 | |
| 109 | K | A | -2.1978 | |
| 110 | L | A | 0.1571 | |
| 111 | I | A | 0.4132 | |
| 112 | G | A | -1.5446 | |
| 113 | E | A | -2.4831 | |
| 114 | R | A | -2.1849 |