| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDANSYSVQYYRITYGETGGNSPVQEFTVPYYYSTATISGLKPGVDYTITVYAYSYYWPGYYYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:13)
[INFO] Main: Simulation completed successfully. (00:01:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6120 | |
| 2 | S | A | 0.6480 | |
| 3 | S | A | 0.9776 | |
| 4 | V | A | 0.5900 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.7087 | |
| 7 | K | A | -2.4792 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.4477 | |
| 10 | V | A | 0.3379 | |
| 11 | V | A | 1.6634 | |
| 12 | A | A | 0.9484 | |
| 13 | A | A | 0.2885 | |
| 14 | T | A | -0.3523 | |
| 15 | P | A | -1.1332 | |
| 16 | T | A | -1.0023 | |
| 17 | S | A | -0.5404 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7924 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.4655 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6192 | |
| 24 | A | A | -0.8958 | |
| 25 | N | A | -1.0225 | |
| 26 | S | A | -0.0095 | |
| 27 | Y | A | 0.8203 | |
| 28 | S | A | 0.6938 | |
| 29 | V | A | 0.0000 | |
| 30 | Q | A | -0.1448 | |
| 31 | Y | A | 0.5875 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.2632 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.4444 | |
| 37 | G | A | -0.7529 | |
| 38 | E | A | -1.6380 | |
| 39 | T | A | -1.4648 | |
| 40 | G | A | -1.2547 | |
| 41 | G | A | -1.4278 | |
| 42 | N | A | -1.5458 | |
| 43 | S | A | -0.9018 | |
| 44 | P | A | -0.4276 | |
| 45 | V | A | 0.2366 | |
| 46 | Q | A | -1.2092 | |
| 47 | E | A | -1.7870 | |
| 48 | F | A | -0.6988 | |
| 49 | T | A | -0.1960 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | 0.7033 | |
| 52 | Y | A | 1.2332 | |
| 53 | Y | A | 2.0136 | |
| 54 | Y | A | 1.8646 | |
| 55 | S | A | 0.3555 | |
| 56 | T | A | 0.3713 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2275 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6643 | |
| 61 | G | A | -1.0313 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3710 | |
| 64 | P | A | -1.6541 | |
| 65 | G | A | -1.4386 | |
| 66 | V | A | -1.4125 | |
| 67 | D | A | -2.1078 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8215 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1884 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.6891 | |
| 74 | A | A | 0.0000 | |
| 75 | Y | A | 1.4572 | |
| 76 | S | A | 0.0000 | |
| 77 | Y | A | 2.0259 | |
| 78 | Y | A | 2.0535 | |
| 79 | W | A | 1.7518 | |
| 80 | P | A | 1.0172 | |
| 81 | G | A | 1.4330 | |
| 82 | Y | A | 2.5996 | |
| 83 | Y | A | 2.9291 | |
| 84 | Y | A | 2.5354 | |
| 85 | S | A | 0.0000 | |
| 86 | P | A | 0.4181 | |
| 87 | I | A | 0.2619 | |
| 88 | S | A | -0.3053 | |
| 89 | I | A | -0.6139 | |
| 90 | N | A | -1.6937 | |
| 91 | Y | A | -1.4647 | |
| 92 | R | A | -2.5527 | |
| 93 | T | A | -1.5288 |