Project name: query_structure

Status: done

Started: 2026-03-17 01:20:20
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDANSYSVQYYRITYGETGGNSPVQEFTVPYYYSTATISGLKPGVDYTITVYAYSYYWPGYYYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:14)
Show buried residues

Minimal score value
-2.6192
Maximal score value
2.9291
Average score
-0.1241
Total score value
-11.5445

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6120
2 S A 0.6480
3 S A 0.9776
4 V A 0.5900
5 P A 0.0000
6 T A -1.7087
7 K A -2.4792
8 L A 0.0000
9 E A -1.4477
10 V A 0.3379
11 V A 1.6634
12 A A 0.9484
13 A A 0.2885
14 T A -0.3523
15 P A -1.1332
16 T A -1.0023
17 S A -0.5404
18 L A 0.0000
19 L A 0.7924
20 I A 0.0000
21 S A -0.4655
22 W A 0.0000
23 D A -2.6192
24 A A -0.8958
25 N A -1.0225
26 S A -0.0095
27 Y A 0.8203
28 S A 0.6938
29 V A 0.0000
30 Q A -0.1448
31 Y A 0.5875
32 Y A 0.0000
33 R A -0.2632
34 I A 0.0000
35 T A 0.0000
36 Y A -0.4444
37 G A -0.7529
38 E A -1.6380
39 T A -1.4648
40 G A -1.2547
41 G A -1.4278
42 N A -1.5458
43 S A -0.9018
44 P A -0.4276
45 V A 0.2366
46 Q A -1.2092
47 E A -1.7870
48 F A -0.6988
49 T A -0.1960
50 V A 0.0000
51 P A 0.7033
52 Y A 1.2332
53 Y A 2.0136
54 Y A 1.8646
55 S A 0.3555
56 T A 0.3713
57 A A 0.0000
58 T A 0.2275
59 I A 0.0000
60 S A -0.6643
61 G A -1.0313
62 L A 0.0000
63 K A -2.3710
64 P A -1.6541
65 G A -1.4386
66 V A -1.4125
67 D A -2.1078
68 Y A 0.0000
69 T A -0.8215
70 I A 0.0000
71 T A -0.1884
72 V A 0.0000
73 Y A 0.6891
74 A A 0.0000
75 Y A 1.4572
76 S A 0.0000
77 Y A 2.0259
78 Y A 2.0535
79 W A 1.7518
80 P A 1.0172
81 G A 1.4330
82 Y A 2.5996
83 Y A 2.9291
84 Y A 2.5354
85 S A 0.0000
86 P A 0.4181
87 I A 0.2619
88 S A -0.3053
89 I A -0.6139
90 N A -1.6937
91 Y A -1.4647
92 R A -2.5527
93 T A -1.5288
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Laboratory of Theory of Biopolymers 2018