| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSIGHPLFNKLGDTENPTAPQHETADVRVNFSFDPKQTQLFIVGCEPPTGEHWDIAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGHPLPDAPPPSPLYVRPPATSPYATLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNIYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9416 | |
| 2 | L | A | 1.9632 | |
| 3 | P | A | 0.8289 | |
| 4 | P | A | 0.3695 | |
| 5 | T | A | 0.1198 | |
| 6 | T | A | 0.1269 | |
| 7 | P | A | 0.1676 | |
| 8 | V | A | 1.2113 | |
| 9 | A | A | 0.0787 | |
| 10 | K | A | -1.0366 | |
| 11 | V | A | -0.1822 | |
| 12 | Q | A | -1.4261 | |
| 13 | S | A | -1.5631 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4236 | |
| 16 | E | A | -2.4425 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4583 | |
| 20 | P | A | 0.1035 | |
| 21 | T | A | 0.1293 | |
| 22 | S | A | -0.1719 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1081 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3035 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9084 | |
| 31 | R | A | -2.6877 | |
| 32 | L | A | -0.8005 | |
| 33 | L | A | 1.1592 | |
| 34 | T | A | 1.3632 | |
| 35 | V | A | 1.8189 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1763 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5713 | |
| 40 | K | A | -1.4927 | |
| 41 | D | A | -0.6484 | |
| 42 | I | A | 1.0393 | |
| 43 | I | A | 1.1530 | |
| 44 | K | A | -1.2977 | |
| 45 | D | A | -2.3962 | |
| 46 | G | A | -1.4315 | |
| 47 | K | A | -1.0604 | |
| 48 | V | A | 1.4418 | |
| 49 | V | A | 2.0316 | |
| 50 | V | A | 1.3254 | |
| 51 | P | A | 0.5363 | |
| 52 | K | A | -0.5705 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1482 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3866 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2682 | |
| 70 | K | A | -1.7913 | |
| 71 | F | A | -0.6430 | |
| 72 | A | A | -0.5734 | |
| 73 | L | A | -0.8752 | |
| 74 | P | A | -1.2866 | |
| 75 | Q | A | -2.5020 | |
| 76 | K | A | -3.1032 | |
| 77 | D | A | -2.9861 | |
| 78 | F | A | -1.6653 | |
| 79 | Y | A | -1.8761 | |
| 80 | D | A | -2.6672 | |
| 81 | P | A | -2.2950 | |
| 82 | E | A | -3.0410 | |
| 83 | K | A | -3.3903 | |
| 84 | E | A | -2.4514 | |
| 85 | R | A | -1.2847 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6602 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9692 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3642 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6925 | |
| 99 | G | A | -0.5259 | |
| 100 | P | A | -0.3759 | |
| 101 | L | A | 0.1014 | |
| 102 | G | A | -0.1680 | |
| 103 | K | A | -0.5976 | |
| 104 | G | A | -0.4928 | |
| 105 | S | A | -0.5517 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | -0.1396 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1660 | |
| 110 | L | A | -0.2237 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1205 | |
| 113 | K | A | -0.5472 | |
| 114 | L | A | -1.0460 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.0453 | |
| 117 | T | A | -0.8132 | |
| 118 | E | A | -1.7375 | |
| 119 | N | A | -1.9173 | |
| 120 | P | A | -1.4111 | |
| 121 | T | A | -0.7617 | |
| 122 | A | A | -0.6055 | |
| 123 | P | A | -0.4734 | |
| 124 | Q | A | -1.3739 | |
| 125 | H | A | -2.0319 | |
| 126 | E | A | -2.5218 | |
| 127 | T | A | -1.6882 | |
| 128 | A | A | -1.2363 | |
| 129 | D | A | -2.0409 | |
| 130 | V | A | -1.3308 | |
| 131 | R | A | -0.9979 | |
| 132 | V | A | -0.2593 | |
| 133 | N | A | -0.8932 | |
| 134 | F | A | -0.3827 | |
| 135 | S | A | -0.3946 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5896 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5593 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2150 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1704 | |
| 157 | D | A | 0.5152 | |
| 158 | I | A | 1.2207 | |
| 159 | A | A | 0.9085 | |
| 160 | P | A | 0.0639 | |
| 161 | P | A | 0.4302 | |
| 162 | C | A | 0.5031 | |
| 163 | P | A | 0.0026 | |
| 164 | G | A | -0.0950 | |
| 165 | L | A | 0.5682 | |
| 166 | P | A | -0.1157 | |
| 167 | P | A | -0.3396 | |
| 168 | G | A | -0.4460 | |
| 169 | A | A | -0.0178 | |
| 170 | C | A | 0.7321 | |
| 171 | P | A | 0.7774 | |
| 172 | P | A | 1.2063 | |
| 173 | I | A | 2.3491 | |
| 174 | Q | A | 1.2405 | |
| 175 | L | A | 1.5351 | |
| 176 | V | A | 0.8733 | |
| 177 | N | A | -0.3026 | |
| 178 | S | A | -0.0977 | |
| 179 | V | A | 0.4110 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3835 | |
| 182 | D | A | 0.0816 | |
| 183 | G | A | -0.1538 | |
| 184 | D | A | -0.5296 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1282 | |
| 190 | F | A | 0.0555 | |
| 191 | G | A | -0.1094 | |
| 192 | N | A | -0.2577 | |
| 193 | M | A | -0.1000 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3655 | |
| 197 | E | A | -2.5820 | |
| 198 | L | A | -1.2119 | |
| 199 | Q | A | -2.5399 | |
| 200 | Q | A | -3.3024 | |
| 201 | D | A | -3.4745 | |
| 202 | R | A | -3.3271 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2183 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3425 | |
| 211 | S | A | -1.8762 | |
| 212 | T | A | -1.4222 | |
| 213 | R | A | -2.0545 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1506 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3122 | |
| 220 | L | A | 0.5650 | |
| 221 | K | A | -1.1906 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8403 | |
| 224 | N | A | -1.5184 | |
| 225 | E | A | -1.2528 | |
| 226 | A | A | -0.6054 | |
| 227 | Y | A | -0.3620 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6670 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0701 | |
| 234 | F | A | 0.2481 | |
| 235 | G | A | -0.8165 | |
| 236 | R | A | -2.5848 | |
| 237 | R | A | -2.8233 | |
| 238 | E | A | -2.1018 | |
| 239 | Q | A | -0.1482 | |
| 240 | V | A | 1.4305 | |
| 241 | Y | A | 1.2153 | |
| 242 | A | A | 0.1702 | |
| 243 | R | A | -1.1800 | |
| 244 | H | A | -0.9870 | |
| 245 | F | A | 0.0723 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4671 | |
| 249 | A | A | -1.1730 | |
| 250 | G | A | -1.0279 | |
| 251 | P | A | -1.1472 | |
| 252 | E | A | -1.3067 | |
| 253 | G | A | -1.2440 | |
| 254 | H | A | -1.4358 | |
| 255 | P | A | -1.1874 | |
| 256 | L | A | -0.2112 | |
| 257 | P | A | -0.8942 | |
| 258 | D | A | -1.9200 | |
| 259 | A | A | -0.9139 | |
| 260 | P | A | -0.9808 | |
| 261 | P | A | -0.5922 | |
| 262 | P | A | -0.1988 | |
| 263 | S | A | -0.0239 | |
| 264 | P | A | 0.6797 | |
| 265 | L | A | 1.4779 | |
| 266 | Y | A | 1.0598 | |
| 267 | V | A | 1.0401 | |
| 268 | R | A | -0.9452 | |
| 269 | P | A | -0.2650 | |
| 270 | P | A | -0.3535 | |
| 271 | A | A | -0.2282 | |
| 272 | T | A | -0.0121 | |
| 273 | S | A | -0.0346 | |
| 274 | P | A | 0.1243 | |
| 275 | Y | A | 0.7782 | |
| 276 | A | A | 0.2077 | |
| 277 | T | A | 0.2145 | |
| 278 | L | A | 0.2994 | |
| 279 | P | A | -0.3028 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.2535 | |
| 282 | D | A | -0.7579 | |
| 283 | Y | A | 0.9675 | |
| 284 | F | A | 0.7282 | |
| 285 | G | A | 0.2198 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9106 | |
| 291 | L | A | 1.6191 | |
| 292 | V | A | 0.6537 | |
| 293 | S | A | -0.1505 | |
| 294 | S | A | -0.9533 | |
| 295 | D | A | -1.8432 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1041 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6388 | |
| 301 | R | A | -1.8469 | |
| 302 | P | A | -0.9506 | |
| 303 | F | A | -0.1905 | |
| 304 | W | A | -0.5636 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0830 | |
| 307 | R | A | -2.8334 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2597 | |
| 310 | G | A | -1.2240 | |
| 311 | N | A | -1.2788 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7734 | |
| 319 | N | A | -0.9102 | |
| 320 | E | A | -1.0293 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3098 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0806 | |
| 333 | N | A | 0.5298 | |
| 334 | F | A | 1.7283 | |
| 335 | T | A | 0.8498 | |
| 336 | I | A | 0.4304 | |
| 337 | S | A | -0.8167 | |
| 338 | Q | A | -1.4465 | |
| 339 | Q | A | -1.0943 | |
| 340 | L | A | 0.5736 | |
| 341 | C | A | -0.0672 | |
| 342 | T | A | -0.4779 | |
| 343 | P | A | -1.1910 | |
| 344 | E | A | -1.7173 | |
| 345 | P | A | -0.6459 | |
| 346 | N | A | -0.6272 | |
| 347 | I | A | 1.5442 | |
| 348 | Y | A | 1.3552 | |
| 349 | D | A | 0.0957 | |
| 350 | P | A | -0.3189 | |
| 351 | S | A | -0.2657 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5372 | |
| 354 | K | A | -1.6478 | |
| 355 | N | A | -1.6945 | |
| 356 | Y | A | -0.0960 | |
| 357 | L | A | 0.6357 | |
| 358 | R | A | 0.9576 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3796 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0783 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0586 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6931 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3011 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3134 | |
| 376 | L | A | -1.7158 | |
| 377 | D | A | -2.0133 | |
| 378 | P | A | -1.0486 | |
| 379 | G | A | -1.0199 | |
| 380 | V | A | -0.9390 | |
| 381 | L | A | -0.5382 | |
| 382 | A | A | -0.6611 | |
| 383 | H | A | -0.8154 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4139 | |
| 386 | T | A | -0.5540 | |
| 387 | M | A | -0.2998 | |
| 388 | N | A | -0.8630 | |
| 389 | P | A | -1.2336 | |
| 390 | T | A | -1.4054 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3975 | |
| 393 | E | A | -2.7271 | |
| 394 | N | A | -2.4650 | |
| 395 | W | A | -1.3122 | |
| 396 | N | A | -1.0789 | |
| 397 | L | A | -0.1976 | |
| 398 | G | A | 0.5326 | |
| 399 | F | A | 2.4158 | |
| 400 | V | A | 1.8328 | |
| 401 | P | A | 0.0493 | |
| 402 | P | A | -1.7591 | |
| 403 | K | A | -3.2882 | |
| 404 | E | A | -3.7980 | |
| 405 | R | A | -3.7921 | |
| 406 | E | A | -3.7350 | |
| 407 | D | A | -2.8524 | |
| 408 | P | A | -1.7540 | |
| 409 | Y | A | -0.9892 | |
| 410 | K | A | -2.1113 | |
| 411 | G | A | -0.6371 | |
| 412 | L | A | 0.6733 | |
| 413 | I | A | 1.5883 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3917 | |
| 416 | E | A | -1.6941 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9609 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0693 | |
| 421 | E | A | -2.8084 | |
| 422 | R | A | -2.6194 | |
| 423 | F | A | -1.3040 | |
| 424 | S | A | -1.4766 | |
| 425 | Q | A | -1.7786 | |
| 426 | D | A | -2.8887 | |
| 427 | L | A | -1.9726 | |
| 428 | D | A | -2.7469 | |
| 429 | Q | A | -2.6010 | |
| 430 | F | A | -1.4107 | |
| 431 | A | A | -0.8861 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5573 | |
| 435 | K | A | -0.7019 | |
| 436 | F | A | 0.1484 | |
| 437 | L | A | 1.0354 | |
| 438 | Y | A | 0.8288 | |
| 439 | Q | A | -0.2782 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine