Project name: gp63_004

Status: done

Started: 2026-04-27 15:06:48
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGISGASFSEYSLGWFRQAPGQGLEAVAAIDSDGSHTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAARKSKLALQPTPSSYQYWGQGTLVTVS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:23)
Show buried residues

Minimal score value
-2.7979
Maximal score value
1.7823
Average score
-0.6801
Total score value
-86.369

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5020
2 V H 0.0000
3 Q H -1.0980
4 L H 0.0000
5 V H 1.0523
6 E H 0.0000
7 S H -0.2108
8 G H -0.7798
9 G H 0.1562
10 G H 0.7587
11 L H 1.4490
12 V H -0.0654
13 Q H -1.3896
14 P H -1.8021
15 G H -1.5980
16 G H -1.1196
17 S H -1.5005
18 L H -1.0229
19 R H -2.3195
20 L H 0.0000
21 S H -0.4999
22 C H 0.0000
23 A H -0.0117
24 A H 0.0000
25 S H -0.8115
26 G H -1.0119
27 I H -0.4448
28 S H -0.5286
29 G H -1.0342
30 A H -0.3762
31 S H -0.6617
32 F H 0.0000
33 S H -1.6322
34 E H -1.9331
35 Y H 0.0000
36 S H 0.0000
37 L H 0.0000
38 G H 0.0000
39 W H 0.0000
40 F H 0.0000
41 R H -0.6562
42 Q H -1.0473
43 A H -1.1677
44 P H -0.9254
45 G H -1.2974
46 Q H -2.0204
47 G H -1.5546
48 L H -1.0972
49 E H -2.0254
50 A H -0.9915
51 V H 0.0000
52 A H 0.0000
53 A H 0.0000
54 I H 0.0000
55 D H 0.0000
56 S H 0.0000
57 D H -2.3180
58 G H -1.4300
59 S H -0.9034
60 H H -0.4848
61 T H -0.1667
62 Y H -0.1804
63 Y H -0.6745
64 A H -1.5007
65 D H -2.4381
66 S H -1.7970
67 V H 0.0000
68 K H -2.5359
69 G H -1.7934
70 R H -1.6757
71 F H 0.0000
72 T H -1.0295
73 I H 0.0000
74 S H -0.7836
75 R H -1.3029
76 D H -1.9174
77 N H -1.9402
78 S H -1.5684
79 K H -2.3026
80 N H -1.4184
81 T H -0.9121
82 L H 0.0000
83 Y H 0.0000
84 L H 0.0000
85 Q H -1.7237
86 M H 0.0000
87 N H -1.9969
88 S H -1.5118
89 L H 0.0000
90 R H -2.7979
91 A H -1.9784
92 E H -2.3996
93 D H 0.0000
94 T H -0.4884
95 A H 0.0000
96 V H 0.8618
97 Y H 0.0000
98 Y H 0.2175
99 C H 0.0000
100 A H 0.0000
101 A H 0.0000
102 R H -1.4266
103 K H -2.0208
104 S H -1.0260
105 K H -1.2555
106 L H 0.3156
107 A H 0.0000
108 L H 0.2225
109 Q H -0.6621
110 P H -0.7598
111 T H -0.6694
112 P H -0.8016
113 S H -0.6318
114 S H -0.7923
115 Y H 0.0000
116 Q H -1.4416
117 Y H -0.8065
118 W H -0.0797
119 G H -0.0631
120 Q H -0.8053
121 G H 0.0000
122 T H 0.6763
123 L H 1.7823
124 V H 0.0000
125 T H 0.3387
126 V H 0.0000
127 S H -0.8503
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Laboratory of Theory of Biopolymers 2018