| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGISGASFSEYSLGWFRQAPGQGLEAVAAIDSDGSHTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAARKSKLALQPTPSSYQYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:22)
[INFO] Main: Simulation completed successfully. (00:02:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5020 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.0980 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0523 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2108 | |
| 8 | G | H | -0.7798 | |
| 9 | G | H | 0.1562 | |
| 10 | G | H | 0.7587 | |
| 11 | L | H | 1.4490 | |
| 12 | V | H | -0.0654 | |
| 13 | Q | H | -1.3896 | |
| 14 | P | H | -1.8021 | |
| 15 | G | H | -1.5980 | |
| 16 | G | H | -1.1196 | |
| 17 | S | H | -1.5005 | |
| 18 | L | H | -1.0229 | |
| 19 | R | H | -2.3195 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4999 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.0117 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.8115 | |
| 26 | G | H | -1.0119 | |
| 27 | I | H | -0.4448 | |
| 28 | S | H | -0.5286 | |
| 29 | G | H | -1.0342 | |
| 30 | A | H | -0.3762 | |
| 31 | S | H | -0.6617 | |
| 32 | F | H | 0.0000 | |
| 33 | S | H | -1.6322 | |
| 34 | E | H | -1.9331 | |
| 35 | Y | H | 0.0000 | |
| 36 | S | H | 0.0000 | |
| 37 | L | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | F | H | 0.0000 | |
| 41 | R | H | -0.6562 | |
| 42 | Q | H | -1.0473 | |
| 43 | A | H | -1.1677 | |
| 44 | P | H | -0.9254 | |
| 45 | G | H | -1.2974 | |
| 46 | Q | H | -2.0204 | |
| 47 | G | H | -1.5546 | |
| 48 | L | H | -1.0972 | |
| 49 | E | H | -2.0254 | |
| 50 | A | H | -0.9915 | |
| 51 | V | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | A | H | 0.0000 | |
| 54 | I | H | 0.0000 | |
| 55 | D | H | 0.0000 | |
| 56 | S | H | 0.0000 | |
| 57 | D | H | -2.3180 | |
| 58 | G | H | -1.4300 | |
| 59 | S | H | -0.9034 | |
| 60 | H | H | -0.4848 | |
| 61 | T | H | -0.1667 | |
| 62 | Y | H | -0.1804 | |
| 63 | Y | H | -0.6745 | |
| 64 | A | H | -1.5007 | |
| 65 | D | H | -2.4381 | |
| 66 | S | H | -1.7970 | |
| 67 | V | H | 0.0000 | |
| 68 | K | H | -2.5359 | |
| 69 | G | H | -1.7934 | |
| 70 | R | H | -1.6757 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -1.0295 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.7836 | |
| 75 | R | H | -1.3029 | |
| 76 | D | H | -1.9174 | |
| 77 | N | H | -1.9402 | |
| 78 | S | H | -1.5684 | |
| 79 | K | H | -2.3026 | |
| 80 | N | H | -1.4184 | |
| 81 | T | H | -0.9121 | |
| 82 | L | H | 0.0000 | |
| 83 | Y | H | 0.0000 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -1.7237 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -1.9969 | |
| 88 | S | H | -1.5118 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -2.7979 | |
| 91 | A | H | -1.9784 | |
| 92 | E | H | -2.3996 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.4884 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.8618 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.2175 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | R | H | -1.4266 | |
| 103 | K | H | -2.0208 | |
| 104 | S | H | -1.0260 | |
| 105 | K | H | -1.2555 | |
| 106 | L | H | 0.3156 | |
| 107 | A | H | 0.0000 | |
| 108 | L | H | 0.2225 | |
| 109 | Q | H | -0.6621 | |
| 110 | P | H | -0.7598 | |
| 111 | T | H | -0.6694 | |
| 112 | P | H | -0.8016 | |
| 113 | S | H | -0.6318 | |
| 114 | S | H | -0.7923 | |
| 115 | Y | H | 0.0000 | |
| 116 | Q | H | -1.4416 | |
| 117 | Y | H | -0.8065 | |
| 118 | W | H | -0.0797 | |
| 119 | G | H | -0.0631 | |
| 120 | Q | H | -0.8053 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.6763 | |
| 123 | L | H | 1.7823 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3387 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8503 |