| Chain sequence(s) |
A: MTYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | MA1A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.105228 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:37)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:48)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:24)
[INFO] Main: Simulation completed successfully. (00:01:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.4110 | mutated: MA1A |
| 2 | T | A | -1.1340 | |
| 3 | Y | A | 0.0000 | |
| 4 | K | A | -1.9257 | |
| 5 | L | A | 0.0000 | |
| 6 | I | A | -1.1045 | |
| 7 | L | A | 0.0000 | |
| 8 | N | A | -1.8630 | |
| 9 | G | A | -2.5349 | |
| 10 | K | A | -2.4393 | |
| 11 | T | A | -1.2559 | |
| 12 | L | A | -1.2995 | |
| 13 | K | A | -2.3528 | |
| 14 | G | A | -1.6746 | |
| 15 | E | A | -2.3466 | |
| 16 | T | A | -1.0699 | |
| 17 | T | A | -1.3618 | |
| 18 | T | A | 0.0000 | |
| 19 | E | A | -1.6304 | |
| 20 | A | A | 0.0000 | |
| 21 | V | A | 0.9342 | |
| 22 | D | A | -0.4493 | |
| 23 | A | A | -0.8842 | |
| 24 | A | A | -0.7162 | |
| 25 | T | A | -1.0373 | |
| 26 | A | A | 0.0000 | |
| 27 | E | A | -2.2883 | |
| 28 | K | A | -2.4909 | |
| 29 | V | A | -1.4032 | |
| 30 | F | A | 0.0000 | |
| 31 | K | A | -2.7927 | |
| 32 | Q | A | -2.4278 | |
| 33 | Y | A | -1.3013 | |
| 34 | A | A | 0.0000 | |
| 35 | N | A | -3.3372 | |
| 36 | D | A | -3.1475 | |
| 37 | N | A | -3.1119 | |
| 38 | G | A | -2.7777 | |
| 39 | V | A | 0.0000 | |
| 40 | D | A | -3.7560 | |
| 41 | G | A | -3.0202 | |
| 42 | E | A | -2.8725 | |
| 43 | W | A | -1.6056 | |
| 44 | T | A | -0.6901 | |
| 45 | Y | A | -1.0621 | |
| 46 | D | A | -2.1992 | |
| 47 | D | A | -2.7168 | |
| 48 | A | A | -1.5672 | |
| 49 | T | A | -1.7086 | |
| 50 | K | A | -2.7171 | |
| 51 | T | A | -1.9846 | |
| 52 | F | A | 0.0000 | |
| 53 | T | A | -0.7614 | |
| 54 | V | A | 0.0000 | |
| 55 | T | A | -2.4370 | |
| 56 | E | A | -3.5377 |