| Chain sequence(s) |
A: MAAEMHSFCAFKADRGPCRADFHRFFFNIFTRQCEEFHYGGCGGNQNRFESLEECKKMCTRDSASSASGDFD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58)
[INFO] Main: Simulation completed successfully. (00:00:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7356 | |
| 2 | A | A | 0.0234 | |
| 3 | A | A | -1.0657 | |
| 4 | E | A | -1.6795 | |
| 5 | M | A | -0.9281 | |
| 6 | H | A | -0.5953 | |
| 7 | S | A | -0.1245 | |
| 8 | F | A | 0.3507 | |
| 9 | C | A | 0.0000 | |
| 10 | A | A | 0.3474 | |
| 11 | F | A | -0.1292 | |
| 12 | K | A | -1.7927 | |
| 13 | A | A | -2.3050 | |
| 14 | D | A | -2.6761 | |
| 15 | R | A | -3.2582 | |
| 16 | G | A | -1.7814 | |
| 17 | P | A | -1.0136 | |
| 18 | C | A | -1.1024 | |
| 19 | R | A | -2.2809 | |
| 20 | A | A | -1.7712 | |
| 21 | D | A | -2.3905 | |
| 22 | F | A | -1.1291 | |
| 23 | H | A | -2.0539 | |
| 24 | R | A | -2.3190 | |
| 25 | F | A | -2.0575 | |
| 26 | F | A | -1.5926 | |
| 27 | F | A | 0.0000 | |
| 28 | N | A | -0.8255 | |
| 29 | I | A | 0.1400 | |
| 30 | F | A | 1.3001 | |
| 31 | T | A | -0.3986 | |
| 32 | R | A | -1.8797 | |
| 33 | Q | A | -2.1576 | |
| 34 | C | A | 0.0000 | |
| 35 | E | A | -2.0176 | |
| 36 | E | A | -2.7984 | |
| 37 | F | A | 0.0000 | |
| 38 | H | A | -2.7415 | |
| 39 | Y | A | 0.0000 | |
| 40 | G | A | 0.0000 | |
| 41 | G | A | -0.9188 | |
| 42 | C | A | -0.0997 | |
| 43 | G | A | -0.8718 | |
| 44 | G | A | -1.8749 | |
| 45 | N | A | -1.7733 | |
| 46 | Q | A | -1.6026 | |
| 47 | N | A | 0.0000 | |
| 48 | R | A | -2.2415 | |
| 49 | F | A | -1.9857 | |
| 50 | E | A | -2.4282 | |
| 51 | S | A | -2.2481 | |
| 52 | L | A | -1.9983 | |
| 53 | E | A | -2.8915 | |
| 54 | E | A | -2.6207 | |
| 55 | C | A | 0.0000 | |
| 56 | K | A | -3.2915 | |
| 57 | K | A | -3.2567 | |
| 58 | M | A | -1.6589 | |
| 59 | C | A | 0.0000 | |
| 60 | T | A | -2.7029 | |
| 61 | R | A | -2.9389 | |
| 62 | D | A | -2.8095 | |
| 63 | S | A | -1.4550 | |
| 64 | A | A | -0.8974 | |
| 65 | S | A | -1.0009 | |
| 66 | S | A | -0.5662 | |
| 67 | A | A | -0.5471 | |
| 68 | S | A | -0.6328 | |
| 69 | G | A | -1.2418 | |
| 70 | D | A | -1.6501 | |
| 71 | F | A | 0.1315 | |
| 72 | D | A | -1.4585 |