Project name: D1K

Status: done

Started: 2026-07-20 05:04:30
Settings
Chain sequence(s) A: DAARNPVKYGSGKQSSRVPLY
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-2.0117
Maximal score value
1.7464
Average score
-0.2774
Total score value
-5.8247

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.7806
2 A A -0.1600
3 A A -0.2569
4 R A -1.9000
5 N A -0.7465
6 P A -0.0243
7 V A 1.4223
8 K A -1.1450
9 Y A 0.9931
10 G A 0.0403
11 S A -0.3360
12 G A -0.8209
13 K A -2.0117
14 Q A -1.5600
15 S A -0.4746
16 S A -0.5923
17 R A -1.5589
18 V A 1.3897
19 P A 0.3469
20 L A 1.7464
21 Y A 1.6043
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Laboratory of Theory of Biopolymers 2018