| Chain sequence(s) |
L: KPADMIHYGVTKD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 68 | K | L | -1.7270 | |
| 69 | P | L | -0.4015 | |
| 70 | A | L | -0.2955 | |
| 71 | D | L | -1.7035 | |
| 72 | M | L | 0.4382 | |
| 73 | I | L | 1.9092 | |
| 74 | H | L | -0.4744 | |
| 75 | Y | L | 0.6543 | |
| 76 | G | L | 0.0000 | |
| 77 | V | L | 1.7599 | |
| 78 | T | L | -0.0584 | |
| 79 | K | L | -2.0337 | |
| 80 | D | L | -2.0941 |