| Chain sequence(s) |
A: MEAHNASAPFNFTLPPNFGKRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKRPQYMRYVIKGGMIIILLCSVAVTVLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVLSALFCLNGRCRRTVSMETGCQNVQLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLLLIAIFWCYEKFKTPKDKTKMIYTAATTEETIPGALGNGTYKGEDCSPCTA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:17)
[INFO] Main: Simulation completed successfully. (00:04:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.0593 | |
| 2 | E | A | -1.7245 | |
| 3 | A | A | -1.3751 | |
| 4 | H | A | -1.9614 | |
| 5 | N | A | -2.0153 | |
| 6 | A | A | -0.9581 | |
| 7 | S | A | -0.4638 | |
| 8 | A | A | -0.0314 | |
| 9 | P | A | 0.3350 | |
| 10 | F | A | 1.3715 | |
| 11 | N | A | -0.1653 | |
| 12 | F | A | 0.5079 | |
| 13 | T | A | 0.1651 | |
| 14 | L | A | -0.2566 | |
| 15 | P | A | -0.2638 | |
| 16 | P | A | -1.0042 | |
| 17 | N | A | -2.1518 | |
| 18 | F | A | -1.4491 | |
| 19 | G | A | -1.4431 | |
| 20 | K | A | -2.0721 | |
| 21 | R | A | -1.3074 | |
| 22 | P | A | -0.4917 | |
| 23 | T | A | 0.4271 | |
| 24 | D | A | 0.2472 | |
| 25 | L | A | 1.4696 | |
| 26 | A | A | 1.2569 | |
| 27 | L | A | 0.0000 | |
| 28 | S | A | 1.9699 | |
| 29 | V | A | 2.9551 | |
| 30 | I | A | 2.2140 | |
| 31 | L | A | 0.0000 | |
| 32 | V | A | 2.1415 | |
| 33 | F | A | 2.4051 | |
| 34 | M | A | 0.0000 | |
| 35 | L | A | 0.0000 | |
| 36 | F | A | 1.7098 | |
| 37 | F | A | 1.4013 | |
| 38 | I | A | 0.0000 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | 1.2988 | |
| 41 | S | A | 0.0000 | |
| 42 | L | A | 0.0000 | |
| 43 | G | A | 0.0000 | |
| 44 | C | A | 0.0000 | |
| 45 | T | A | -0.0511 | |
| 46 | M | A | 0.0000 | |
| 47 | E | A | 0.0365 | |
| 48 | F | A | 1.3143 | |
| 49 | S | A | -0.0191 | |
| 50 | K | A | -0.5211 | |
| 51 | I | A | 0.0000 | |
| 52 | K | A | -0.2505 | |
| 53 | A | A | -0.2053 | |
| 54 | H | A | -0.7626 | |
| 55 | L | A | 0.0476 | |
| 56 | W | A | 0.1960 | |
| 57 | K | A | -1.6818 | |
| 58 | P | A | -1.3326 | |
| 59 | K | A | -2.0188 | |
| 60 | G | A | -0.9426 | |
| 61 | L | A | -0.1595 | |
| 62 | A | A | -0.1174 | |
| 63 | I | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | L | A | 1.2510 | |
| 66 | V | A | 1.8425 | |
| 67 | A | A | 0.0000 | |
| 68 | Q | A | 0.0000 | |
| 69 | Y | A | 0.0000 | |
| 70 | G | A | 0.9186 | |
| 71 | I | A | 1.1051 | |
| 72 | M | A | 0.0000 | |
| 73 | P | A | 0.0000 | |
| 74 | L | A | 1.7476 | |
| 75 | T | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | F | A | 1.4084 | |
| 78 | V | A | 1.8575 | |
| 79 | L | A | 0.0000 | |
| 80 | G | A | 0.0000 | |
| 81 | K | A | -0.6586 | |
| 82 | V | A | 1.2409 | |
| 83 | F | A | 0.1701 | |
| 84 | R | A | -1.8206 | |
| 85 | L | A | -1.5652 | |
| 86 | K | A | -2.6350 | |
| 87 | N | A | -2.3173 | |
| 88 | I | A | -0.6262 | |
| 89 | E | A | 0.0000 | |
| 90 | A | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | L | A | 0.0000 | |
| 95 | V | A | 0.0000 | |
| 96 | C | A | 0.0000 | |
| 97 | G | A | 0.0000 | |
| 98 | C | A | 0.0000 | |
| 99 | S | A | 0.0000 | |
| 100 | P | A | 0.0000 | |
| 101 | G | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | N | A | 0.1277 | |
| 104 | L | A | 0.7594 | |
| 105 | S | A | 0.0000 | |
| 106 | N | A | 1.1225 | |
| 107 | V | A | 2.2887 | |
| 108 | F | A | 0.0000 | |
| 109 | S | A | 0.0000 | |
| 110 | L | A | 1.3752 | |
| 111 | A | A | 1.0982 | |
| 112 | M | A | 0.0000 | |
| 113 | K | A | -1.3556 | |
| 114 | G | A | 0.0000 | |
| 115 | D | A | -1.1994 | |
| 116 | M | A | -0.0023 | |
| 117 | N | A | -0.6985 | |
| 118 | L | A | -0.3990 | |
| 119 | S | A | 0.0000 | |
| 120 | I | A | -0.1627 | |
| 121 | V | A | 0.0000 | |
| 122 | M | A | 0.0000 | |
| 123 | T | A | 0.0000 | |
| 124 | T | A | 0.0000 | |
| 125 | C | A | 0.0000 | |
| 126 | S | A | 0.0000 | |
| 127 | T | A | 0.0000 | |
| 128 | F | A | 1.2764 | |
| 129 | C | A | 0.8709 | |
| 130 | A | A | 0.0000 | |
| 131 | L | A | 1.3494 | |
| 132 | G | A | 0.4448 | |
| 133 | M | A | 0.7895 | |
| 134 | M | A | 0.0000 | |
| 135 | P | A | 0.7353 | |
| 136 | L | A | 1.3790 | |
| 137 | L | A | 0.0000 | |
| 138 | L | A | 0.0000 | |
| 139 | Y | A | 0.9858 | |
| 140 | I | A | 0.8271 | |
| 141 | Y | A | 0.6611 | |
| 142 | S | A | 0.0000 | |
| 143 | R | A | -2.1183 | |
| 144 | G | A | -1.2636 | |
| 145 | I | A | -1.3483 | |
| 146 | Y | A | 0.0000 | |
| 147 | D | A | -2.7693 | |
| 148 | G | A | -2.6286 | |
| 149 | D | A | -3.5554 | |
| 150 | L | A | -2.8728 | |
| 151 | K | A | -3.1871 | |
| 152 | D | A | -3.2968 | |
| 153 | K | A | -2.4107 | |
| 154 | V | A | 0.0000 | |
| 155 | P | A | -1.1213 | |
| 156 | Y | A | -0.5671 | |
| 157 | K | A | -1.0419 | |
| 158 | G | A | 0.2571 | |
| 159 | I | A | 0.0000 | |
| 160 | V | A | 1.0757 | |
| 161 | I | A | 1.9513 | |
| 162 | S | A | 0.0000 | |
| 163 | L | A | 0.0000 | |
| 164 | V | A | 2.2278 | |
| 165 | L | A | 1.9531 | |
| 166 | V | A | 0.0000 | |
| 167 | L | A | 1.8182 | |
| 168 | I | A | 2.2588 | |
| 169 | P | A | 0.0000 | |
| 170 | C | A | 0.0000 | |
| 171 | T | A | 1.8106 | |
| 172 | I | A | 2.6325 | |
| 173 | G | A | 0.0000 | |
| 174 | I | A | 1.1323 | |
| 175 | V | A | 1.2950 | |
| 176 | L | A | 0.0852 | |
| 177 | K | A | -0.5142 | |
| 178 | S | A | -0.6603 | |
| 179 | K | A | -2.3726 | |
| 180 | R | A | -2.5870 | |
| 181 | P | A | -1.8514 | |
| 182 | Q | A | -1.6170 | |
| 183 | Y | A | 0.0200 | |
| 184 | M | A | -0.5275 | |
| 185 | R | A | -1.3029 | |
| 186 | Y | A | 0.3355 | |
| 187 | V | A | 0.0000 | |
| 188 | I | A | 0.1081 | |
| 189 | K | A | -1.0365 | |
| 190 | G | A | 0.2182 | |
| 191 | G | A | 0.0000 | |
| 192 | M | A | 1.5912 | |
| 193 | I | A | 2.1156 | |
| 194 | I | A | 2.2482 | |
| 195 | I | A | 2.6005 | |
| 196 | L | A | 3.4612 | |
| 197 | L | A | 3.4662 | |
| 198 | C | A | 0.0000 | |
| 199 | S | A | 2.3087 | |
| 200 | V | A | 3.0540 | |
| 201 | A | A | 2.0744 | |
| 202 | V | A | 0.0000 | |
| 203 | T | A | 1.7364 | |
| 204 | V | A | 2.4566 | |
| 205 | L | A | 1.8018 | |
| 206 | S | A | 0.0000 | |
| 207 | A | A | 1.2082 | |
| 208 | I | A | 2.1360 | |
| 209 | N | A | 0.0000 | |
| 210 | V | A | 0.0000 | |
| 211 | G | A | -0.3022 | |
| 212 | K | A | -1.2320 | |
| 213 | S | A | -0.2332 | |
| 214 | I | A | 0.2672 | |
| 215 | M | A | 0.7840 | |
| 216 | F | A | 1.0908 | |
| 217 | A | A | 0.0000 | |
| 218 | M | A | 1.1270 | |
| 219 | T | A | 0.7708 | |
| 220 | P | A | 0.4848 | |
| 221 | L | A | 0.6381 | |
| 222 | L | A | 0.0000 | |
| 223 | I | A | 0.8804 | |
| 224 | A | A | 0.6958 | |
| 225 | T | A | 0.0000 | |
| 226 | S | A | 0.0000 | |
| 227 | S | A | 1.0442 | |
| 228 | L | A | 1.0786 | |
| 229 | M | A | 0.0000 | |
| 230 | P | A | 0.0000 | |
| 231 | F | A | 1.5944 | |
| 232 | I | A | 1.5337 | |
| 233 | G | A | 0.0000 | |
| 234 | F | A | 0.0000 | |
| 235 | L | A | 2.0429 | |
| 236 | L | A | 2.0876 | |
| 237 | G | A | 0.0000 | |
| 238 | Y | A | 2.0274 | |
| 239 | V | A | 2.4823 | |
| 240 | L | A | 2.2105 | |
| 241 | S | A | 0.0000 | |
| 242 | A | A | 1.5544 | |
| 243 | L | A | 2.4184 | |
| 244 | F | A | 1.4540 | |
| 245 | C | A | 1.2247 | |
| 246 | L | A | 0.0000 | |
| 247 | N | A | -1.4045 | |
| 248 | G | A | -1.6956 | |
| 249 | R | A | -2.4096 | |
| 250 | C | A | 0.0000 | |
| 251 | R | A | -0.6805 | |
| 252 | R | A | -1.0172 | |
| 253 | T | A | 0.0000 | |
| 254 | V | A | 0.0000 | |
| 255 | S | A | 0.0000 | |
| 256 | M | A | 0.0000 | |
| 257 | E | A | 0.0000 | |
| 258 | T | A | 0.0000 | |
| 259 | G | A | 0.0000 | |
| 260 | C | A | 0.0000 | |
| 261 | Q | A | 0.0000 | |
| 262 | N | A | 0.0000 | |
| 263 | V | A | 0.0000 | |
| 264 | Q | A | -0.0629 | |
| 265 | L | A | 0.0000 | |
| 266 | C | A | 0.0000 | |
| 267 | S | A | 0.0000 | |
| 268 | T | A | 0.0000 | |
| 269 | I | A | 0.0000 | |
| 270 | L | A | 0.0000 | |
| 271 | N | A | 0.7519 | |
| 272 | V | A | 2.1554 | |
| 273 | A | A | 0.7383 | |
| 274 | F | A | 0.0000 | |
| 275 | P | A | -0.0634 | |
| 276 | P | A | -0.7106 | |
| 277 | E | A | -1.2916 | |
| 278 | V | A | 0.3656 | |
| 279 | I | A | 0.0000 | |
| 280 | G | A | 0.0000 | |
| 281 | P | A | 0.0000 | |
| 282 | L | A | 0.0000 | |
| 283 | F | A | 0.0000 | |
| 284 | F | A | 0.3601 | |
| 285 | F | A | 0.0000 | |
| 286 | P | A | 0.0000 | |
| 287 | L | A | 0.8799 | |
| 288 | L | A | 0.0000 | |
| 289 | Y | A | 0.0000 | |
| 290 | M | A | 1.4764 | |
| 291 | I | A | 2.4215 | |
| 292 | F | A | 1.8964 | |
| 293 | Q | A | 0.0000 | |
| 294 | L | A | 1.7651 | |
| 295 | G | A | 1.1761 | |
| 296 | E | A | 1.0852 | |
| 297 | G | A | 0.0000 | |
| 298 | L | A | 2.0227 | |
| 299 | L | A | 1.9857 | |
| 300 | L | A | 1.6859 | |
| 301 | I | A | 0.0000 | |
| 302 | A | A | 1.7595 | |
| 303 | I | A | 1.8804 | |
| 304 | F | A | 1.1875 | |
| 305 | W | A | 0.9642 | |
| 306 | C | A | 1.1264 | |
| 307 | Y | A | 0.9968 | |
| 308 | E | A | -1.2299 | |
| 309 | K | A | -1.2026 | |
| 310 | F | A | 0.4278 | |
| 311 | K | A | -2.0058 | |
| 312 | T | A | -1.8110 | |
| 313 | P | A | -2.4138 | |
| 314 | K | A | -3.2587 | |
| 315 | D | A | -2.8499 | |
| 316 | K | A | -2.4704 | |
| 317 | T | A | -1.3261 | |
| 318 | K | A | -1.5314 | |
| 319 | M | A | 0.4085 | |
| 320 | I | A | 1.6261 | |
| 321 | Y | A | 1.5641 | |
| 322 | T | A | 0.7532 | |
| 323 | A | A | 0.3424 | |
| 324 | A | A | -0.1710 | |
| 325 | T | A | -0.6617 | |
| 326 | T | A | -0.9990 | |
| 327 | E | A | -2.2931 | |
| 328 | E | A | -2.2482 | |
| 329 | T | A | -0.6548 | |
| 330 | I | A | 0.7944 | |
| 331 | P | A | 0.1157 | |
| 332 | G | A | 0.2846 | |
| 333 | A | A | 0.5906 | |
| 334 | L | A | 0.8748 | |
| 335 | G | A | -0.4870 | |
| 336 | N | A | -1.2499 | |
| 337 | G | A | -0.9267 | |
| 338 | T | A | -0.6057 | |
| 339 | Y | A | -0.1933 | |
| 340 | K | A | -2.2202 | |
| 341 | G | A | -2.2702 | |
| 342 | E | A | -3.1280 | |
| 343 | D | A | -3.0403 | |
| 344 | C | A | -1.0498 | |
| 345 | S | A | -0.8500 | |
| 346 | P | A | -0.0084 | |
| 347 | C | A | 0.6602 | |
| 348 | T | A | 0.2579 | |
| 349 | A | A | 0.1918 |