| Chain sequence(s) |
A: EQHADPICNKPCKTHDDCSGAWFCQACWNSARTCGPYVG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.6309 | |
| 2 | Q | A | -2.5020 | |
| 3 | H | A | -1.8642 | |
| 4 | A | A | -0.8640 | |
| 5 | D | A | -0.4192 | |
| 6 | P | A | -0.2973 | |
| 7 | I | A | -0.2909 | |
| 8 | C | A | -0.3424 | |
| 9 | N | A | -1.6207 | |
| 10 | K | A | -1.9675 | |
| 11 | P | A | -1.8408 | |
| 12 | C | A | -2.3914 | |
| 13 | K | A | -2.8425 | |
| 14 | T | A | -2.2254 | |
| 15 | H | A | -1.8138 | |
| 16 | D | A | -3.0420 | |
| 17 | D | A | -2.9931 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -1.5584 | |
| 20 | G | A | -0.8564 | |
| 21 | A | A | 0.0000 | |
| 22 | W | A | 1.0393 | |
| 23 | F | A | 0.7164 | |
| 24 | C | A | 0.0000 | |
| 25 | Q | A | 0.3675 | |
| 26 | A | A | -0.0775 | |
| 27 | C | A | 0.0000 | |
| 28 | W | A | -0.8441 | |
| 29 | N | A | -1.9598 | |
| 30 | S | A | -1.3651 | |
| 31 | A | A | -1.6655 | |
| 32 | R | A | -2.9474 | |
| 33 | T | A | 0.0000 | |
| 34 | C | A | 0.0000 | |
| 35 | G | A | 0.0489 | |
| 36 | P | A | 1.1872 | |
| 37 | Y | A | 2.1522 | |
| 38 | V | A | 2.2279 | |
| 39 | G | A | 0.7960 |