Project name: 80afaa1a2eecf9b

Status: done

Started: 2025-06-03 04:58:01
Settings
Chain sequence(s) H: QMQLVESGGGVVQPGRSLRLSCTASGFTFSNNGMHWVRQAPGKGLEWVAVIWFDGMNKFYVDSVKGRFTISRDNSKNTLYLEMNSLRAEDTAIYYCAREGDGSGIYYYYGMDVWGQGTTVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPIFTFGPGTKVDIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-3.5025
Maximal score value
2.1834
Average score
-0.5758
Total score value
-134.1721

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4047
2 M H -0.8014
3 Q H -0.9299
4 L H 0.0000
5 V H 0.4790
6 E H 0.0000
7 S H -0.5666
8 G H -1.0003
9 G H -0.4048
11 G H 0.4463
12 V H 1.4339
13 V H 0.0000
14 Q H -1.3479
15 P H -2.0487
16 G H -2.2536
17 R H -2.7492
18 S H -2.0202
19 L H -1.4508
20 R H -2.3161
21 L H 0.0000
22 S H -0.5894
23 C H 0.0000
24 T H -0.3541
25 A H 0.0000
26 S H -0.8842
27 G H -0.9859
28 F H -0.5527
29 T H -0.5787
30 F H 0.0000
35 S H -1.1448
36 N H -0.9940
37 N H 0.0000
38 G H 0.0000
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7833
45 A H -1.1844
46 P H -0.9780
47 G H -1.4488
48 K H -2.2283
49 G H -1.3133
50 L H 0.0000
51 E H -0.8838
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 V H 0.0000
56 I H 0.0000
57 W H 0.0000
58 F H 0.3014
59 D H -0.6764
62 G H -0.2156
63 M H 0.5057
64 N H -0.2192
65 K H -0.2791
66 F H 0.2425
67 Y H -0.3806
68 V H -0.8301
69 D H -2.1786
70 S H -1.6705
71 V H 0.0000
72 K H -2.1383
74 G H -1.5993
75 R H -1.5190
76 F H 0.0000
77 T H -0.9500
78 I H 0.0000
79 S H -0.3704
80 R H -0.7921
81 D H -1.6099
82 N H -1.8240
83 S H -1.6113
84 K H -2.4517
85 N H -1.9243
86 T H -1.1324
87 L H 0.0000
88 Y H -0.6842
89 L H 0.0000
90 E H -1.7665
91 M H 0.0000
92 N H -2.0279
93 S H -1.8384
94 L H 0.0000
95 R H -3.0327
96 A H -1.9331
97 E H -2.4443
98 D H 0.0000
99 T H -0.7264
100 A H 0.0000
101 I H 0.1230
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.3797
107 E H 0.0000
108 G H -0.1564
109 D H 0.0272
110 G H 0.0381
111 S H -0.0655
111A G H 0.2961
111B I H 2.1834
112B Y H 2.0653
112A Y H 1.7461
112 Y H 1.5477
113 Y H 0.7632
114 G H 0.0000
115 M H 0.0000
116 D H -0.8841
117 V H -0.4534
118 W H 0.0000
119 G H 0.0000
120 Q H -1.3291
121 G H -0.5877
122 T H -0.2522
123 T H 0.0019
124 V H 0.0000
125 T H 0.0408
126 V H 0.0000
127 S H -0.3807
128 S H -0.3332
1 E L -1.4458
2 I L -0.3725
3 V L 0.8343
4 L L 0.0000
5 T L -0.5734
6 Q L 0.0000
7 S L -0.8803
8 P L -0.6417
9 G L -0.8618
10 T L -0.7070
11 L L -0.2240
12 S L -0.2171
13 L L -0.4109
14 S L -0.9541
15 P L -1.4569
16 G L -1.9537
17 E L -2.4380
18 R L -3.0962
19 A L 0.0000
20 T L -0.5595
21 L L 0.0000
22 S L -0.9176
23 C L 0.0000
24 R L -2.2760
25 A L 0.0000
26 S L -0.9765
27 Q L -1.6865
28 S L -1.2985
29 V L 0.0000
30 S L -0.4345
36 S L -0.3762
37 S L 0.3579
38 Y L 0.6233
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.4521
46 P L -1.0169
47 G L -1.4543
48 Q L -2.0932
49 A L -1.4219
50 P L 0.0000
51 R L -1.6222
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.2367
56 G L 0.0000
57 A L 0.0000
65 S L -0.5912
66 S L -0.4865
67 R L -1.2311
68 A L -0.7660
69 T L -0.5757
70 G L -0.8669
71 I L 0.0000
72 P L -1.3028
74 D L -2.3920
75 R L -2.1190
76 F L 0.0000
77 S L -0.9308
78 G L -0.4915
79 S L -0.6685
80 G L -1.0711
83 S L -1.0122
84 G L -1.2028
85 T L -1.6863
86 D L -2.0729
87 F L 0.0000
88 T L -0.7624
89 L L 0.0000
90 T L -0.8464
91 I L 0.0000
92 S L -2.4823
93 R L -3.5025
94 L L 0.0000
95 E L -2.6562
96 P L -1.4695
97 E L -1.9641
98 D L 0.0000
99 F L -0.3201
100 A L 0.0000
101 V L -0.1910
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 G L -0.3165
109 S L -0.2798
113 S L -0.4235
114 P L 0.0487
115 I L -0.2200
116 F L 0.0000
117 T L 0.1525
118 F L 0.0000
119 G L 0.0000
120 P L -0.5686
121 G L -0.7357
122 T L 0.0000
123 K L -1.1397
124 V L 0.0000
125 D L 0.0968
126 I L 1.0444
127 K L -0.7972
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Laboratory of Theory of Biopolymers 2018