Project name: 80bd4dd6b772b58

Status: done

Started: 2026-02-11 11:49:40
Settings
Chain sequence(s) A: GGHKGHK
C: GGHKGHK
B: GGHKGHK
D: GGHKGHK
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:42)
Show buried residues

Minimal score value
-3.831
Maximal score value
0.0
Average score
-2.7834
Total score value
-77.9348

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.3884
2 G A -2.4821
3 H A -3.2322
4 K A -3.7768
5 G A 0.0000
6 H A -3.5113
7 K A -3.3348
1 G B -1.3671
2 G B -2.1703
3 H B -3.3657
4 K B -3.5818
5 G B -3.7997
6 H B -3.3088
7 K B -3.2577
1 G C -1.5460
2 G C -2.2817
3 H C -3.5259
4 K C -3.7677
5 G C -3.8310
6 H C -3.4577
7 K C -3.3326
1 G D -1.4020
2 G D -2.5177
3 H D -3.2589
4 K D -3.6247
5 G D 0.0000
6 H D -3.5303
7 K D -3.2819
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Laboratory of Theory of Biopolymers 2018