| Chain sequence(s) |
A: ALEKLKELLKKHGFSEKTIDYLLERNPGAMKVLAELYEAGADDDFIVRQVNRLLEGLLRRLREKMSAAETFEEILAYYEEINELRS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:06)
[INFO] Main: Simulation completed successfully. (00:02:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.8045 | |
| 2 | L | A | -2.0709 | |
| 3 | E | A | -2.8750 | |
| 4 | K | A | -3.3427 | |
| 5 | L | A | 0.0000 | |
| 6 | K | A | -3.3586 | |
| 7 | E | A | -3.7880 | |
| 8 | L | A | 0.0000 | |
| 9 | L | A | 0.0000 | |
| 10 | K | A | -3.9287 | |
| 11 | K | A | -3.4511 | |
| 12 | H | A | -2.6046 | |
| 13 | G | A | -1.8418 | |
| 14 | F | A | -1.9959 | |
| 15 | S | A | -2.5226 | |
| 16 | E | A | -3.4128 | |
| 17 | K | A | -3.1763 | |
| 18 | T | A | 0.0000 | |
| 19 | I | A | 0.0000 | |
| 20 | D | A | -3.4013 | |
| 21 | Y | A | 0.0000 | |
| 22 | L | A | 0.0000 | |
| 23 | L | A | -2.2764 | |
| 24 | E | A | -2.9505 | |
| 25 | R | A | -2.4976 | |
| 26 | N | A | -1.7870 | |
| 27 | P | A | -1.5423 | |
| 28 | G | A | -1.0957 | |
| 29 | A | A | -0.6612 | |
| 30 | M | A | 0.0000 | |
| 31 | K | A | -1.4022 | |
| 32 | V | A | -0.0289 | |
| 33 | L | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | E | A | -2.1389 | |
| 36 | L | A | -0.9482 | |
| 37 | Y | A | -1.6792 | |
| 38 | E | A | -2.5330 | |
| 39 | A | A | -1.5221 | |
| 40 | G | A | -1.6532 | |
| 41 | A | A | -1.6890 | |
| 42 | D | A | -2.6279 | |
| 43 | D | A | -2.7990 | |
| 44 | D | A | -2.7781 | |
| 45 | F | A | -1.3367 | |
| 46 | I | A | 0.0000 | |
| 47 | V | A | -1.9961 | |
| 48 | R | A | -2.6048 | |
| 49 | Q | A | -2.1479 | |
| 50 | V | A | 0.0000 | |
| 51 | N | A | -2.3985 | |
| 52 | R | A | -3.2340 | |
| 53 | L | A | -2.0359 | |
| 54 | L | A | -2.2451 | |
| 55 | E | A | -3.7400 | |
| 56 | G | A | -2.9284 | |
| 57 | L | A | 0.0000 | |
| 58 | L | A | -3.4588 | |
| 59 | R | A | -4.5097 | |
| 60 | R | A | -4.5763 | |
| 61 | L | A | -3.6232 | |
| 62 | R | A | -4.3197 | |
| 63 | E | A | -4.3852 | |
| 64 | K | A | -3.7415 | |
| 65 | M | A | -2.0382 | |
| 66 | S | A | -2.0312 | |
| 67 | A | A | -1.7130 | |
| 68 | A | A | -1.6137 | |
| 69 | E | A | -1.9216 | |
| 70 | T | A | -0.5460 | |
| 71 | F | A | 0.8682 | |
| 72 | E | A | -0.9401 | |
| 73 | E | A | -1.1696 | |
| 74 | I | A | 0.0003 | |
| 75 | L | A | 0.6579 | |
| 76 | A | A | -0.2699 | |
| 77 | Y | A | -0.9073 | |
| 78 | Y | A | -0.5943 | |
| 79 | E | A | -2.0212 | |
| 80 | E | A | -1.8499 | |
| 81 | I | A | 0.0000 | |
| 82 | N | A | -2.4286 | |
| 83 | E | A | -2.6985 | |
| 84 | L | A | 0.0000 | |
| 85 | R | A | -3.1108 | |
| 86 | S | A | -2.4081 |