Project name: t3g1

Status: done

Started: 2025-10-28 09:43:24
Settings
Chain sequence(s) A: AGPAQPSPVDSFDARKPETWSPLQRHAEFFDRNQDGRITVGETYDGLRALGVGPLRAAAFSTLINAGLGVSTGAPWYNPLEIQVNRISAGKHGSDTGVYDADGRLDPAKFDAIFQKHDTDKDSCLNQAEVSAMIAANRTDRAGNVAAKGEFGLLMTLAGSDREHDGKTERVITRETMERLYDGSLFYRLAGEPCPFQP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:25)
Show buried residues

Minimal score value
-3.6959
Maximal score value
1.9152
Average score
-0.8179
Total score value
-161.9383

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2190
2 G A -0.6962
3 P A -0.7703
4 A A -0.8299
5 Q A -1.4370
6 P A -1.1096
7 S A -1.0289
8 P A 0.0000
9 V A -0.6752
10 D A -1.6873
11 S A -1.2150
12 F A -1.3656
13 D A -2.2677
14 A A 0.0000
15 R A -3.4724
16 K A -3.0764
17 P A -2.3727
18 E A -2.7753
19 T A -1.8535
20 W A 0.0000
21 S A 0.0000
22 P A -0.4317
23 L A 0.0000
24 Q A 0.0000
25 R A -0.5961
26 H A -0.3738
27 A A 0.0000
28 E A 0.0000
29 F A 0.0000
30 F A -0.5722
31 D A 0.0000
32 R A -1.8893
33 N A -2.5500
34 Q A -2.8123
35 D A -3.0939
36 G A 0.0000
37 R A -1.8226
38 I A 0.0000
39 T A -0.3542
40 V A 0.5062
41 G A -0.5748
42 E A -1.1255
43 T A 0.0000
44 Y A -0.4473
45 D A -1.5819
46 G A 0.0000
47 L A 0.0000
48 R A -1.5400
49 A A -0.8982
50 L A 0.0000
51 G A -0.8891
52 V A 0.0000
53 G A -0.5006
54 P A -0.1706
55 L A 0.8878
56 R A -0.3898
57 A A 0.0000
58 A A 0.2871
59 A A 0.7329
60 F A 0.9729
61 S A 0.0000
62 T A 1.0130
63 L A 1.9152
64 I A 1.2161
65 N A 0.0000
66 A A 1.1253
67 G A 0.5852
68 L A 0.6962
69 G A 0.0000
70 V A 1.7680
71 S A 0.4042
72 T A 0.0000
73 G A 0.3344
74 A A 0.7291
75 P A 1.0514
76 W A 1.8706
77 Y A 1.6203
78 N A 0.7103
79 P A 0.9965
80 L A 1.2184
81 E A 0.0000
82 I A 0.0000
83 Q A 0.0000
84 V A 0.0000
85 N A -1.0467
86 R A -1.2492
87 I A 0.0000
88 S A -0.8755
89 A A -0.4075
90 G A -0.4327
91 K A -1.0260
92 H A -1.0247
93 G A -1.7000
94 S A 0.0000
95 D A -1.0977
96 T A 0.0000
97 G A -0.9027
98 V A 0.0000
99 Y A 0.0000
100 D A -1.5106
101 A A -0.9075
102 D A -1.1701
103 G A 0.0000
104 R A -0.8915
105 L A -0.7942
106 D A -1.3991
107 P A -1.2584
108 A A -1.0298
109 K A -1.6202
110 F A 0.0000
111 D A -2.3549
112 A A -1.8038
113 I A 0.0000
114 F A 0.0000
115 Q A -2.7291
116 K A -2.6782
117 H A -1.7724
118 D A 0.0000
119 T A -2.3238
120 D A -3.0910
121 K A -3.6289
122 D A -2.8269
123 S A -2.0828
124 C A -1.7362
125 L A 0.0000
126 N A -1.6222
127 Q A -1.4836
128 A A -0.7068
129 E A 0.0000
130 V A 0.0000
131 S A -0.7711
132 A A -0.5993
133 M A 0.0000
134 I A 0.0000
135 A A -0.8940
136 A A -0.8365
137 N A -1.4453
138 R A -2.5138
139 T A -2.0715
140 D A -2.3226
141 R A -2.2240
142 A A -1.0770
143 G A 0.0000
144 N A 0.0000
145 V A 0.1100
146 A A -0.3860
147 A A 0.0000
148 K A -1.7412
149 G A -1.2881
150 E A -2.0140
151 F A 0.0000
152 G A -1.4382
153 L A -0.7669
154 L A 0.0000
155 M A 0.0000
156 T A -0.1631
157 L A 0.2281
158 A A -0.0567
159 G A -0.9118
160 S A -1.4120
161 D A -3.0248
162 R A -2.9532
163 E A -3.6959
164 H A -3.0472
165 D A -3.1348
166 G A -2.7822
167 K A -3.4391
168 T A -2.8950
169 E A -2.7654
170 R A -2.3367
171 V A 0.0000
172 I A 0.0000
173 T A -1.4834
174 R A -2.2008
175 E A -2.7905
176 T A -1.7632
177 M A 0.0000
178 E A -2.8514
179 R A -2.2426
180 L A -1.0875
181 Y A 0.0000
182 D A -1.0831
183 G A 0.0000
184 S A 0.0000
185 L A 0.0000
186 F A -0.3978
187 Y A 0.0000
188 R A -1.8856
189 L A -0.5031
190 A A -0.8449
191 G A -1.2119
192 E A -1.2775
193 P A -0.9302
194 C A -0.8205
195 P A -1.1260
196 F A 0.0000
197 Q A -1.5748
198 P A -1.1847
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Laboratory of Theory of Biopolymers 2018