| Chain sequence(s) |
A: AGPAQPSPVDSFDARKPETWSPLQRHAEFFDRNQDGRITVGETYDGLRALGVGPLRAAAFSTLINAGLGVSTGAPWYNPLEIQVNRISAGKHGSDTGVYDADGRLDPAKFDAIFQKHDTDKDSCLNQAEVSAMIAANRTDRAGNVAAKGEFGLLMTLAGSDREHDGKTERVITRETMERLYDGSLFYRLAGEPCPFQP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:24)
[INFO] Main: Simulation completed successfully. (00:02:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.2190 | |
| 2 | G | A | -0.6962 | |
| 3 | P | A | -0.7703 | |
| 4 | A | A | -0.8299 | |
| 5 | Q | A | -1.4370 | |
| 6 | P | A | -1.1096 | |
| 7 | S | A | -1.0289 | |
| 8 | P | A | 0.0000 | |
| 9 | V | A | -0.6752 | |
| 10 | D | A | -1.6873 | |
| 11 | S | A | -1.2150 | |
| 12 | F | A | -1.3656 | |
| 13 | D | A | -2.2677 | |
| 14 | A | A | 0.0000 | |
| 15 | R | A | -3.4724 | |
| 16 | K | A | -3.0764 | |
| 17 | P | A | -2.3727 | |
| 18 | E | A | -2.7753 | |
| 19 | T | A | -1.8535 | |
| 20 | W | A | 0.0000 | |
| 21 | S | A | 0.0000 | |
| 22 | P | A | -0.4317 | |
| 23 | L | A | 0.0000 | |
| 24 | Q | A | 0.0000 | |
| 25 | R | A | -0.5961 | |
| 26 | H | A | -0.3738 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | 0.0000 | |
| 29 | F | A | 0.0000 | |
| 30 | F | A | -0.5722 | |
| 31 | D | A | 0.0000 | |
| 32 | R | A | -1.8893 | |
| 33 | N | A | -2.5500 | |
| 34 | Q | A | -2.8123 | |
| 35 | D | A | -3.0939 | |
| 36 | G | A | 0.0000 | |
| 37 | R | A | -1.8226 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | -0.3542 | |
| 40 | V | A | 0.5062 | |
| 41 | G | A | -0.5748 | |
| 42 | E | A | -1.1255 | |
| 43 | T | A | 0.0000 | |
| 44 | Y | A | -0.4473 | |
| 45 | D | A | -1.5819 | |
| 46 | G | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | R | A | -1.5400 | |
| 49 | A | A | -0.8982 | |
| 50 | L | A | 0.0000 | |
| 51 | G | A | -0.8891 | |
| 52 | V | A | 0.0000 | |
| 53 | G | A | -0.5006 | |
| 54 | P | A | -0.1706 | |
| 55 | L | A | 0.8878 | |
| 56 | R | A | -0.3898 | |
| 57 | A | A | 0.0000 | |
| 58 | A | A | 0.2871 | |
| 59 | A | A | 0.7329 | |
| 60 | F | A | 0.9729 | |
| 61 | S | A | 0.0000 | |
| 62 | T | A | 1.0130 | |
| 63 | L | A | 1.9152 | |
| 64 | I | A | 1.2161 | |
| 65 | N | A | 0.0000 | |
| 66 | A | A | 1.1253 | |
| 67 | G | A | 0.5852 | |
| 68 | L | A | 0.6962 | |
| 69 | G | A | 0.0000 | |
| 70 | V | A | 1.7680 | |
| 71 | S | A | 0.4042 | |
| 72 | T | A | 0.0000 | |
| 73 | G | A | 0.3344 | |
| 74 | A | A | 0.7291 | |
| 75 | P | A | 1.0514 | |
| 76 | W | A | 1.8706 | |
| 77 | Y | A | 1.6203 | |
| 78 | N | A | 0.7103 | |
| 79 | P | A | 0.9965 | |
| 80 | L | A | 1.2184 | |
| 81 | E | A | 0.0000 | |
| 82 | I | A | 0.0000 | |
| 83 | Q | A | 0.0000 | |
| 84 | V | A | 0.0000 | |
| 85 | N | A | -1.0467 | |
| 86 | R | A | -1.2492 | |
| 87 | I | A | 0.0000 | |
| 88 | S | A | -0.8755 | |
| 89 | A | A | -0.4075 | |
| 90 | G | A | -0.4327 | |
| 91 | K | A | -1.0260 | |
| 92 | H | A | -1.0247 | |
| 93 | G | A | -1.7000 | |
| 94 | S | A | 0.0000 | |
| 95 | D | A | -1.0977 | |
| 96 | T | A | 0.0000 | |
| 97 | G | A | -0.9027 | |
| 98 | V | A | 0.0000 | |
| 99 | Y | A | 0.0000 | |
| 100 | D | A | -1.5106 | |
| 101 | A | A | -0.9075 | |
| 102 | D | A | -1.1701 | |
| 103 | G | A | 0.0000 | |
| 104 | R | A | -0.8915 | |
| 105 | L | A | -0.7942 | |
| 106 | D | A | -1.3991 | |
| 107 | P | A | -1.2584 | |
| 108 | A | A | -1.0298 | |
| 109 | K | A | -1.6202 | |
| 110 | F | A | 0.0000 | |
| 111 | D | A | -2.3549 | |
| 112 | A | A | -1.8038 | |
| 113 | I | A | 0.0000 | |
| 114 | F | A | 0.0000 | |
| 115 | Q | A | -2.7291 | |
| 116 | K | A | -2.6782 | |
| 117 | H | A | -1.7724 | |
| 118 | D | A | 0.0000 | |
| 119 | T | A | -2.3238 | |
| 120 | D | A | -3.0910 | |
| 121 | K | A | -3.6289 | |
| 122 | D | A | -2.8269 | |
| 123 | S | A | -2.0828 | |
| 124 | C | A | -1.7362 | |
| 125 | L | A | 0.0000 | |
| 126 | N | A | -1.6222 | |
| 127 | Q | A | -1.4836 | |
| 128 | A | A | -0.7068 | |
| 129 | E | A | 0.0000 | |
| 130 | V | A | 0.0000 | |
| 131 | S | A | -0.7711 | |
| 132 | A | A | -0.5993 | |
| 133 | M | A | 0.0000 | |
| 134 | I | A | 0.0000 | |
| 135 | A | A | -0.8940 | |
| 136 | A | A | -0.8365 | |
| 137 | N | A | -1.4453 | |
| 138 | R | A | -2.5138 | |
| 139 | T | A | -2.0715 | |
| 140 | D | A | -2.3226 | |
| 141 | R | A | -2.2240 | |
| 142 | A | A | -1.0770 | |
| 143 | G | A | 0.0000 | |
| 144 | N | A | 0.0000 | |
| 145 | V | A | 0.1100 | |
| 146 | A | A | -0.3860 | |
| 147 | A | A | 0.0000 | |
| 148 | K | A | -1.7412 | |
| 149 | G | A | -1.2881 | |
| 150 | E | A | -2.0140 | |
| 151 | F | A | 0.0000 | |
| 152 | G | A | -1.4382 | |
| 153 | L | A | -0.7669 | |
| 154 | L | A | 0.0000 | |
| 155 | M | A | 0.0000 | |
| 156 | T | A | -0.1631 | |
| 157 | L | A | 0.2281 | |
| 158 | A | A | -0.0567 | |
| 159 | G | A | -0.9118 | |
| 160 | S | A | -1.4120 | |
| 161 | D | A | -3.0248 | |
| 162 | R | A | -2.9532 | |
| 163 | E | A | -3.6959 | |
| 164 | H | A | -3.0472 | |
| 165 | D | A | -3.1348 | |
| 166 | G | A | -2.7822 | |
| 167 | K | A | -3.4391 | |
| 168 | T | A | -2.8950 | |
| 169 | E | A | -2.7654 | |
| 170 | R | A | -2.3367 | |
| 171 | V | A | 0.0000 | |
| 172 | I | A | 0.0000 | |
| 173 | T | A | -1.4834 | |
| 174 | R | A | -2.2008 | |
| 175 | E | A | -2.7905 | |
| 176 | T | A | -1.7632 | |
| 177 | M | A | 0.0000 | |
| 178 | E | A | -2.8514 | |
| 179 | R | A | -2.2426 | |
| 180 | L | A | -1.0875 | |
| 181 | Y | A | 0.0000 | |
| 182 | D | A | -1.0831 | |
| 183 | G | A | 0.0000 | |
| 184 | S | A | 0.0000 | |
| 185 | L | A | 0.0000 | |
| 186 | F | A | -0.3978 | |
| 187 | Y | A | 0.0000 | |
| 188 | R | A | -1.8856 | |
| 189 | L | A | -0.5031 | |
| 190 | A | A | -0.8449 | |
| 191 | G | A | -1.2119 | |
| 192 | E | A | -1.2775 | |
| 193 | P | A | -0.9302 | |
| 194 | C | A | -0.8205 | |
| 195 | P | A | -1.1260 | |
| 196 | F | A | 0.0000 | |
| 197 | Q | A | -1.5748 | |
| 198 | P | A | -1.1847 |