Project name: query_structure

Status: done

Started: 2026-03-16 23:50:16
Settings
Chain sequence(s) A: LCNEPCSSNSDCIGITLCQFCKEKTDQYGLTYRTCNLLP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:17)
Show buried residues

Minimal score value
-3.2712
Maximal score value
2.6489
Average score
-0.2777
Total score value
-10.8297

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.4725
2 C A 0.9118
3 N A -1.1702
4 E A -1.8318
5 P A -1.9073
6 C A -1.8452
7 S A -1.4737
8 S A -1.4009
9 N A -1.5658
10 S A -0.6147
11 D A -0.8305
12 C A 0.0000
13 I A 1.6116
14 G A 1.4037
15 I A 2.6489
16 T A 2.2083
17 L A 2.6151
18 C A 0.0000
19 Q A 0.6345
20 F A 0.5243
21 C A -1.6399
22 K A -2.2525
23 E A -3.2712
24 K A -2.2148
25 T A -0.9166
26 D A -0.6067
27 Q A -0.7375
28 Y A 0.7729
29 G A 0.3097
30 L A 1.1180
31 T A -0.3549
32 Y A -1.0922
33 R A -2.9300
34 T A -2.6386
35 C A 0.0000
36 N A -0.2247
37 L A 2.1305
38 L A 2.0239
39 P A 0.3043
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Laboratory of Theory of Biopolymers 2018