Project name: query_structure

Status: done

Started: 2026-03-16 23:45:56
Settings
Chain sequence(s) A: GTIPCGESCVYIPCLTSALGCSCKNKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:18)
Show buried residues

Minimal score value
-2.0897
Maximal score value
2.1865
Average score
0.0336
Total score value
1.0429

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.9384
2 T A 0.0619
3 I A 1.0528
4 P A 0.1106
5 C A 0.1541
6 G A -0.2259
7 E A -0.0112
8 S A 0.2431
9 C A 0.8028
10 V A 1.9763
11 Y A 2.1865
12 I A 1.6271
13 P A 1.0050
14 C A 0.0000
15 L A 1.6047
16 T A 0.9092
17 S A 0.5508
18 A A 0.9136
19 L A 1.3226
20 G A -0.1991
21 C A 0.0000
22 S A -0.8556
23 C A -0.6397
24 K A -2.0897
25 N A -2.0855
26 K A -1.4386
27 V A -0.8958
28 C A 0.0000
29 Y A -0.9551
30 R A -1.3893
31 N A -1.7543
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Laboratory of Theory of Biopolymers 2018