Project name: 8117e051b26d6a1

Status: done

Started: 2024-12-20 11:53:50
Settings
Chain sequence(s) A: NFMLNQPHSVSESPGKTVTISCTRSSGNIASNYVQWYQQSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDARNVVFGGGTRLTVLG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:43)
Show buried residues

Minimal score value
-2.8057
Maximal score value
1.6083
Average score
-0.7479
Total score value
-80.7681

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.5599
2 F A 0.0000
3 M A 0.2192
4 L A 0.0000
5 N A -1.2129
6 Q A 0.0000
7 P A -1.1879
8 H A -1.7627
9 S A -1.2104
11 V A -0.7968
12 S A -0.6153
13 E A -0.9904
14 S A -0.7717
15 P A -1.4059
16 G A -1.6070
17 K A -1.9458
18 T A -1.1781
19 V A 0.0000
20 T A -0.1549
21 I A 0.0000
22 S A -0.4673
23 C A 0.0000
24 T A -0.7069
25 R A 0.0000
26 S A -0.7537
27 S A -0.8986
28 G A -1.5701
29 N A -2.1288
30 I A 0.0000
35 A A -0.9759
36 S A -0.7512
37 N A -0.2980
38 Y A 0.4666
39 V A 0.0000
40 Q A 0.0000
41 W A 0.0000
42 Y A 0.4824
43 Q A -0.6223
44 Q A -1.3341
45 S A -0.2753
49 A A -0.0501
50 P A 0.0338
51 I A 1.0836
52 T A 0.4866
53 V A 0.0000
54 I A 0.0000
55 Y A -0.9707
56 E A -1.8630
57 D A -1.5171
65 N A -2.1915
66 Q A -2.1751
67 R A -1.9788
68 P A -0.8106
69 S A -0.6618
70 G A -0.8423
71 V A -0.8803
72 P A -1.2351
74 D A -2.1441
75 R A -1.4531
76 F A 0.0000
77 A A -1.1553
78 G A -1.1592
79 S A -1.2010
80 I A -0.9238
81 D A -2.0355
82 R A -2.8057
83 S A -1.6961
84 S A -1.3844
85 N A -1.8174
86 S A 0.0000
87 A A 0.0000
88 S A -0.4568
89 L A 0.0000
90 T A -0.2095
91 I A 0.0000
92 S A -1.1674
93 G A -1.4318
94 L A 0.0000
95 K A -2.4189
96 T A -1.9226
97 E A -2.6885
98 D A 0.0000
99 E A -2.5797
100 A A -1.9112
101 D A -1.7991
102 Y A 0.0000
103 Y A -0.1455
104 C A 0.0000
105 Q A 0.0000
106 S A 0.0000
107 Y A 0.1950
108 D A -1.3982
109 A A -1.3387
114 R A -2.0885
115 N A -1.4005
116 V A 1.0377
117 V A 0.0000
118 F A 1.6083
119 G A 0.0000
120 G A -0.6008
121 G A 0.0000
122 T A 0.0000
123 R A -2.1840
124 L A 0.0000
125 T A -0.7960
126 V A 0.0000
127 L A 0.3364
128 G A -0.0461
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Laboratory of Theory of Biopolymers 2018