| Chain sequence(s) |
A: NFMLNQPHSVSESPGKTVTISCTRSSGNIASNYVQWYQQSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDARNVVFGGGTRLTVLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.5599 | |
| 2 | F | A | 0.0000 | |
| 3 | M | A | 0.2192 | |
| 4 | L | A | 0.0000 | |
| 5 | N | A | -1.2129 | |
| 6 | Q | A | 0.0000 | |
| 7 | P | A | -1.1879 | |
| 8 | H | A | -1.7627 | |
| 9 | S | A | -1.2104 | |
| 11 | V | A | -0.7968 | |
| 12 | S | A | -0.6153 | |
| 13 | E | A | -0.9904 | |
| 14 | S | A | -0.7717 | |
| 15 | P | A | -1.4059 | |
| 16 | G | A | -1.6070 | |
| 17 | K | A | -1.9458 | |
| 18 | T | A | -1.1781 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.1549 | |
| 21 | I | A | 0.0000 | |
| 22 | S | A | -0.4673 | |
| 23 | C | A | 0.0000 | |
| 24 | T | A | -0.7069 | |
| 25 | R | A | 0.0000 | |
| 26 | S | A | -0.7537 | |
| 27 | S | A | -0.8986 | |
| 28 | G | A | -1.5701 | |
| 29 | N | A | -2.1288 | |
| 30 | I | A | 0.0000 | |
| 35 | A | A | -0.9759 | |
| 36 | S | A | -0.7512 | |
| 37 | N | A | -0.2980 | |
| 38 | Y | A | 0.4666 | |
| 39 | V | A | 0.0000 | |
| 40 | Q | A | 0.0000 | |
| 41 | W | A | 0.0000 | |
| 42 | Y | A | 0.4824 | |
| 43 | Q | A | -0.6223 | |
| 44 | Q | A | -1.3341 | |
| 45 | S | A | -0.2753 | |
| 49 | A | A | -0.0501 | |
| 50 | P | A | 0.0338 | |
| 51 | I | A | 1.0836 | |
| 52 | T | A | 0.4866 | |
| 53 | V | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | Y | A | -0.9707 | |
| 56 | E | A | -1.8630 | |
| 57 | D | A | -1.5171 | |
| 65 | N | A | -2.1915 | |
| 66 | Q | A | -2.1751 | |
| 67 | R | A | -1.9788 | |
| 68 | P | A | -0.8106 | |
| 69 | S | A | -0.6618 | |
| 70 | G | A | -0.8423 | |
| 71 | V | A | -0.8803 | |
| 72 | P | A | -1.2351 | |
| 74 | D | A | -2.1441 | |
| 75 | R | A | -1.4531 | |
| 76 | F | A | 0.0000 | |
| 77 | A | A | -1.1553 | |
| 78 | G | A | -1.1592 | |
| 79 | S | A | -1.2010 | |
| 80 | I | A | -0.9238 | |
| 81 | D | A | -2.0355 | |
| 82 | R | A | -2.8057 | |
| 83 | S | A | -1.6961 | |
| 84 | S | A | -1.3844 | |
| 85 | N | A | -1.8174 | |
| 86 | S | A | 0.0000 | |
| 87 | A | A | 0.0000 | |
| 88 | S | A | -0.4568 | |
| 89 | L | A | 0.0000 | |
| 90 | T | A | -0.2095 | |
| 91 | I | A | 0.0000 | |
| 92 | S | A | -1.1674 | |
| 93 | G | A | -1.4318 | |
| 94 | L | A | 0.0000 | |
| 95 | K | A | -2.4189 | |
| 96 | T | A | -1.9226 | |
| 97 | E | A | -2.6885 | |
| 98 | D | A | 0.0000 | |
| 99 | E | A | -2.5797 | |
| 100 | A | A | -1.9112 | |
| 101 | D | A | -1.7991 | |
| 102 | Y | A | 0.0000 | |
| 103 | Y | A | -0.1455 | |
| 104 | C | A | 0.0000 | |
| 105 | Q | A | 0.0000 | |
| 106 | S | A | 0.0000 | |
| 107 | Y | A | 0.1950 | |
| 108 | D | A | -1.3982 | |
| 109 | A | A | -1.3387 | |
| 114 | R | A | -2.0885 | |
| 115 | N | A | -1.4005 | |
| 116 | V | A | 1.0377 | |
| 117 | V | A | 0.0000 | |
| 118 | F | A | 1.6083 | |
| 119 | G | A | 0.0000 | |
| 120 | G | A | -0.6008 | |
| 121 | G | A | 0.0000 | |
| 122 | T | A | 0.0000 | |
| 123 | R | A | -2.1840 | |
| 124 | L | A | 0.0000 | |
| 125 | T | A | -0.7960 | |
| 126 | V | A | 0.0000 | |
| 127 | L | A | 0.3364 | |
| 128 | G | A | -0.0461 |