| Chain sequence(s) |
B: ADPAAAQAAGAGGAAGAGKAAGGGGGGGGAGGAAAGREAAKDAAAAAAGGARGGGGGGGAAIGGGGGVEGAGAGG
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.8563 | |
| 2 | D | B | -1.9928 | |
| 3 | P | B | -1.3392 | |
| 4 | A | B | -1.0257 | |
| 5 | A | B | -0.9270 | |
| 6 | A | B | -1.1126 | |
| 7 | Q | B | -1.6275 | |
| 8 | A | B | -0.6707 | |
| 9 | A | B | -0.5548 | |
| 10 | G | B | -1.0064 | |
| 11 | A | B | -0.8883 | |
| 12 | G | B | -1.0249 | |
| 13 | G | B | -0.7682 | |
| 14 | A | B | -0.3962 | |
| 15 | A | B | -0.4394 | |
| 16 | G | B | -0.7671 | |
| 17 | A | B | -0.8041 | |
| 18 | G | B | -1.3668 | |
| 19 | K | B | -2.0177 | |
| 20 | A | B | -1.0192 | |
| 21 | A | B | -0.8847 | |
| 22 | G | B | -0.9953 | |
| 23 | G | B | -1.2258 | |
| 24 | G | B | -1.1187 | |
| 25 | G | B | -1.2422 | |
| 26 | G | B | -1.2713 | |
| 27 | G | B | -1.2429 | |
| 28 | G | B | -1.3880 | |
| 29 | G | B | -1.1222 | |
| 30 | A | B | -0.8656 | |
| 31 | G | B | -0.9249 | |
| 32 | G | B | -1.3012 | |
| 33 | A | B | -1.6249 | |
| 34 | A | B | -1.5490 | |
| 35 | A | B | -1.6504 | |
| 36 | G | B | -2.2554 | |
| 37 | R | B | -3.4619 | |
| 38 | E | B | -3.4628 | |
| 39 | A | B | -2.4269 | |
| 40 | A | B | -2.4931 | |
| 41 | K | B | -3.5875 | |
| 42 | D | B | -3.0508 | |
| 43 | A | B | -1.4130 | |
| 44 | A | B | -1.1213 | |
| 45 | A | B | -0.9747 | |
| 46 | A | B | -0.6291 | |
| 47 | A | B | -0.2999 | |
| 48 | A | B | -0.2111 | |
| 49 | G | B | -0.7947 | |
| 50 | G | B | -1.1284 | |
| 51 | A | B | -1.3807 | |
| 52 | R | B | -2.4026 | |
| 53 | G | B | -1.9244 | |
| 54 | G | B | -1.7002 | |
| 55 | G | B | -1.6828 | |
| 56 | G | B | -1.3275 | |
| 57 | G | B | -1.2164 | |
| 58 | G | B | -1.2961 | |
| 59 | G | B | -0.6763 | |
| 60 | A | B | 0.0339 | |
| 61 | A | B | 0.6857 | |
| 62 | I | B | 1.5963 | |
| 63 | G | B | 0.2015 | |
| 64 | G | B | -0.4760 | |
| 65 | G | B | -0.8575 | |
| 66 | G | B | -1.0967 | |
| 67 | G | B | -0.5560 | |
| 68 | V | B | 0.4170 | |
| 69 | E | B | -1.5386 | |
| 70 | G | B | -1.1583 | |
| 71 | A | B | -0.9049 | |
| 72 | G | B | -0.9570 | |
| 73 | A | B | -0.5442 | |
| 74 | G | B | -0.7829 | |
| 75 | G | B | -0.7287 |