| Chain sequence(s) |
A: GAPASHPEPELRSTSDYVTPTDLLYYAETDLLTETGHPTKDIVVNGKVVVPKVSAYQWKVFKLTLPDPNQLPLPSADFLDPSTEILIWRLRAFKIHVFGPLGKGTYGHPNFNRLGDVNNPTTPVHETADVTVAYSFTPKRLQSFIIGDLPPLGVYTTKAAPAPGLPPGAPPPTVTKTTVIQHGDNADIGFGAKDFKALEPSKDEVPEIIRDTTTKRPDLERMEAEPTGRRMFTYNERESSSDVKKFVRAGPDLKPLPRSPPPSPLYVPPPPSSPYAILPSTDYFTLPDQGEITEADLLFNKPIFLTKTKGLNDGVLWHNQLYVTIVDNSRGAIETNKTQISTPAVNVYDPSNYVTSKTYTREYKLELIVQLCKIPLTPETLALLERIDPRILVEAKLPDVPPREFPDPYAGLKFHEIDLTDKLSSNLSESALGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4957 | |
| 2 | A | A | -0.2984 | |
| 3 | P | A | -0.4813 | |
| 4 | A | A | -0.5313 | |
| 5 | S | A | -1.0621 | |
| 6 | H | A | -1.7091 | |
| 7 | P | A | -1.9386 | |
| 8 | E | A | -2.8078 | |
| 9 | P | A | -2.5300 | |
| 10 | E | A | -2.4386 | |
| 11 | L | A | -1.1371 | |
| 12 | R | A | -1.1621 | |
| 13 | S | A | -0.8627 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.3039 | |
| 16 | D | A | -1.9554 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6440 | |
| 20 | P | A | -0.7152 | |
| 21 | T | A | -0.9070 | |
| 22 | D | A | -1.6155 | |
| 23 | L | A | -0.5091 | |
| 24 | L | A | -0.1842 | |
| 25 | Y | A | -0.0901 | |
| 26 | Y | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.2424 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3900 | |
| 31 | L | A | 0.3414 | |
| 32 | L | A | 0.0605 | |
| 33 | T | A | -0.1260 | |
| 34 | E | A | -0.4109 | |
| 35 | T | A | -0.2509 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.3162 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5258 | |
| 40 | K | A | -1.9963 | |
| 41 | D | A | -0.6351 | |
| 42 | I | A | 1.5853 | |
| 43 | V | A | 2.4109 | |
| 44 | V | A | 1.8482 | |
| 45 | N | A | -0.5063 | |
| 46 | G | A | -0.3250 | |
| 47 | K | A | -0.0511 | |
| 48 | V | A | 2.0866 | |
| 49 | V | A | 2.7231 | |
| 50 | V | A | 1.6223 | |
| 51 | P | A | 0.1261 | |
| 52 | K | A | -0.9366 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.4147 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.3027 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | -1.2568 | |
| 67 | D | A | -1.2643 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.5040 | |
| 70 | Q | A | -1.4785 | |
| 71 | L | A | -0.5776 | |
| 72 | P | A | -0.2601 | |
| 73 | L | A | -0.0331 | |
| 74 | P | A | -0.1947 | |
| 75 | S | A | -0.5438 | |
| 76 | A | A | -0.8895 | |
| 77 | D | A | -1.8739 | |
| 78 | F | A | -0.8503 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -1.8347 | |
| 81 | P | A | -1.0756 | |
| 82 | S | A | -0.8316 | |
| 83 | T | A | -0.7759 | |
| 84 | E | A | -1.0355 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.3451 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | -0.7730 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.4497 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.3939 | |
| 99 | G | A | -0.1924 | |
| 100 | P | A | -0.1443 | |
| 101 | L | A | 0.0009 | |
| 102 | G | A | -0.4713 | |
| 103 | K | A | -1.0906 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3040 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.4655 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.7289 | |
| 110 | N | A | -1.7117 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -0.5711 | |
| 114 | L | A | -0.5429 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.1911 | |
| 117 | V | A | -0.8782 | |
| 118 | N | A | -2.0087 | |
| 119 | N | A | -2.1056 | |
| 120 | P | A | -1.1436 | |
| 121 | T | A | -0.6570 | |
| 122 | T | A | -0.2696 | |
| 123 | P | A | 0.2413 | |
| 124 | V | A | 0.1156 | |
| 125 | H | A | -0.3482 | |
| 126 | E | A | -1.4318 | |
| 127 | T | A | -1.1458 | |
| 128 | A | A | -1.0140 | |
| 129 | D | A | -1.9579 | |
| 130 | V | A | -1.0781 | |
| 131 | T | A | -0.7967 | |
| 132 | V | A | -0.1279 | |
| 133 | A | A | -0.1486 | |
| 134 | Y | A | -0.0167 | |
| 135 | S | A | -0.1393 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.3518 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | R | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0000 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.4901 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -0.6903 | |
| 155 | Y | A | -0.6325 | |
| 156 | T | A | -0.5685 | |
| 157 | T | A | 0.0000 | |
| 158 | K | A | -1.6698 | |
| 159 | A | A | -0.5827 | |
| 160 | A | A | -0.3110 | |
| 161 | P | A | -0.4446 | |
| 162 | A | A | -0.1245 | |
| 163 | P | A | -0.3109 | |
| 164 | G | A | -0.2855 | |
| 165 | L | A | 0.2332 | |
| 166 | P | A | -0.2467 | |
| 167 | P | A | -0.4859 | |
| 168 | G | A | -0.3523 | |
| 169 | A | A | -0.0510 | |
| 170 | P | A | -0.2594 | |
| 171 | P | A | -0.4881 | |
| 172 | P | A | -0.3201 | |
| 173 | T | A | -0.4820 | |
| 174 | V | A | 0.1424 | |
| 175 | T | A | -0.4135 | |
| 176 | K | A | -1.0656 | |
| 177 | T | A | -0.7707 | |
| 178 | T | A | -0.2288 | |
| 179 | V | A | 0.1051 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7707 | |
| 182 | H | A | -1.0754 | |
| 183 | G | A | -0.7618 | |
| 184 | D | A | -0.7811 | |
| 185 | N | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.2311 | |
| 190 | F | A | -0.0063 | |
| 191 | G | A | -0.4201 | |
| 192 | A | A | 0.0000 | |
| 193 | K | A | -1.4420 | |
| 194 | D | A | -1.7290 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -2.8986 | |
| 197 | A | A | -1.5635 | |
| 198 | L | A | -1.3699 | |
| 199 | E | A | -1.8704 | |
| 200 | P | A | -1.5561 | |
| 201 | S | A | -1.4614 | |
| 202 | K | A | -2.8254 | |
| 203 | D | A | -1.8668 | |
| 204 | E | A | -1.3547 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | E | A | -1.6825 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.3961 | |
| 211 | D | A | -2.3868 | |
| 212 | T | A | -1.4092 | |
| 213 | T | A | -0.9590 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | R | A | -1.3435 | |
| 217 | P | A | -0.9847 | |
| 218 | D | A | -1.7097 | |
| 219 | L | A | -1.9117 | |
| 220 | E | A | -3.2632 | |
| 221 | R | A | -3.3399 | |
| 222 | M | A | 0.0000 | |
| 223 | E | A | -3.4827 | |
| 224 | A | A | -2.1799 | |
| 225 | E | A | -1.7145 | |
| 226 | P | A | -0.7823 | |
| 227 | T | A | -0.5198 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.7254 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7245 | |
| 234 | Y | A | -0.4821 | |
| 235 | N | A | -1.0241 | |
| 236 | E | A | -1.8219 | |
| 237 | R | A | -2.2367 | |
| 238 | E | A | -2.2365 | |
| 239 | S | A | -1.4634 | |
| 240 | S | A | -1.0902 | |
| 241 | S | A | -1.2610 | |
| 242 | D | A | -1.8308 | |
| 243 | V | A | -0.6628 | |
| 244 | K | A | -1.6700 | |
| 245 | K | A | -1.6625 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | A | A | -0.9826 | |
| 250 | G | A | -0.6365 | |
| 251 | P | A | -0.8672 | |
| 252 | D | A | -0.7758 | |
| 253 | L | A | 0.1312 | |
| 254 | K | A | -1.1640 | |
| 255 | P | A | -1.0035 | |
| 256 | L | A | -0.2865 | |
| 257 | P | A | -1.0560 | |
| 258 | R | A | -1.7505 | |
| 259 | S | A | -1.3090 | |
| 260 | P | A | -0.8114 | |
| 261 | P | A | -0.4848 | |
| 262 | P | A | -0.1297 | |
| 263 | S | A | 0.2920 | |
| 264 | P | A | 0.7693 | |
| 265 | L | A | 1.9129 | |
| 266 | Y | A | 1.7534 | |
| 267 | V | A | 1.9476 | |
| 268 | P | A | 0.8637 | |
| 269 | P | A | 0.7137 | |
| 270 | P | A | -0.1268 | |
| 271 | P | A | -0.0543 | |
| 272 | S | A | -0.0929 | |
| 273 | S | A | 0.3264 | |
| 274 | P | A | 0.6394 | |
| 275 | Y | A | 1.7601 | |
| 276 | A | A | 1.1851 | |
| 277 | I | A | 1.9896 | |
| 278 | L | A | 1.0756 | |
| 279 | P | A | 0.1231 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.7029 | |
| 282 | D | A | -0.9821 | |
| 283 | Y | A | 0.3890 | |
| 284 | F | A | -0.1110 | |
| 285 | T | A | -0.6295 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.1467 | |
| 289 | Q | A | 0.0000 | |
| 290 | G | A | -1.3326 | |
| 291 | E | A | -2.0104 | |
| 292 | I | A | -1.2340 | |
| 293 | T | A | -1.3399 | |
| 294 | E | A | -1.8447 | |
| 295 | A | A | -1.0858 | |
| 296 | D | A | -1.4269 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | -0.9717 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.1457 | |
| 301 | K | A | -1.5161 | |
| 302 | P | A | -0.7953 | |
| 303 | I | A | -0.0167 | |
| 304 | F | A | -0.2523 | |
| 305 | L | A | 0.0000 | |
| 306 | T | A | -0.8594 | |
| 307 | K | A | -2.1383 | |
| 308 | T | A | 0.0000 | |
| 309 | K | A | -2.4199 | |
| 310 | G | A | -1.5687 | |
| 311 | L | A | -0.5312 | |
| 312 | N | A | 0.0000 | |
| 313 | D | A | -1.0937 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7370 | |
| 319 | N | A | -0.5428 | |
| 320 | Q | A | -0.6790 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | G | A | 0.0000 | |
| 332 | A | A | -0.6306 | |
| 333 | I | A | -1.1596 | |
| 334 | E | A | -2.3816 | |
| 335 | T | A | -2.3800 | |
| 336 | N | A | -2.4824 | |
| 337 | K | A | -1.7800 | |
| 338 | T | A | -0.2757 | |
| 339 | Q | A | 0.5482 | |
| 340 | I | A | 1.8816 | |
| 341 | S | A | 0.6240 | |
| 342 | T | A | 0.0960 | |
| 343 | P | A | -0.1709 | |
| 344 | A | A | 0.1629 | |
| 345 | V | A | 0.4873 | |
| 346 | N | A | 0.0261 | |
| 347 | V | A | 1.7144 | |
| 348 | Y | A | 1.4990 | |
| 349 | D | A | -0.0459 | |
| 350 | P | A | -0.2250 | |
| 351 | S | A | 0.0996 | |
| 352 | N | A | 0.5796 | |
| 353 | Y | A | 0.6687 | |
| 354 | V | A | 1.3295 | |
| 355 | T | A | -0.6407 | |
| 356 | S | A | -1.5302 | |
| 357 | K | A | -2.4276 | |
| 358 | T | A | -1.4628 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.4531 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.1687 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.5906 | |
| 365 | L | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3504 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6438 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6473 | |
| 376 | L | A | -0.3561 | |
| 377 | T | A | -0.6669 | |
| 378 | P | A | -0.9745 | |
| 379 | E | A | -1.8717 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.4542 | |
| 382 | A | A | -1.3057 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -1.0945 | |
| 386 | R | A | -1.3860 | |
| 387 | I | A | -0.3218 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -0.7554 | |
| 390 | R | A | -1.1416 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.8052 | |
| 394 | E | A | -2.1594 | |
| 395 | A | A | -1.5840 | |
| 396 | K | A | -2.3515 | |
| 397 | L | A | -1.5039 | |
| 398 | P | A | -1.3867 | |
| 399 | D | A | -1.9661 | |
| 400 | V | A | -1.3299 | |
| 401 | P | A | -1.3981 | |
| 402 | P | A | -1.9400 | |
| 403 | R | A | -2.5202 | |
| 404 | E | A | -2.5040 | |
| 405 | F | A | -1.1288 | |
| 406 | P | A | -1.3472 | |
| 407 | D | A | -1.8934 | |
| 408 | P | A | -0.9028 | |
| 409 | Y | A | -0.6936 | |
| 410 | A | A | -0.8815 | |
| 411 | G | A | -0.7770 | |
| 412 | L | A | -0.5098 | |
| 413 | K | A | -1.9010 | |
| 414 | F | A | -1.3696 | |
| 415 | H | A | -1.6756 | |
| 416 | E | A | -2.6087 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.7109 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.6531 | |
| 421 | D | A | -2.3167 | |
| 422 | K | A | -1.9588 | |
| 423 | L | A | -0.7490 | |
| 424 | S | A | -0.8678 | |
| 425 | S | A | -0.5397 | |
| 426 | N | A | -1.3808 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.7315 | |
| 429 | E | A | -2.3887 | |
| 430 | S | A | 0.0000 | |
| 431 | A | A | -1.0729 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2305 | |
| 435 | E | A | -1.8257 | |
| 436 | Y | A | -0.8646 | |
| 437 | L | A | -0.3337 | |
| 438 | N | A | -2.0355 | |
| 439 | R | A | -2.2645 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine