| Chain sequence(s) |
A: APTTTTKVDIAAFNPDKDGTIELKEALAAASAAFDKLDPDKDGTLEAKELKGRVSEADLKKADPDNDGTLEKKEYLAAVEAQFKAANPDNDGTIEARELASPAGSALVNLIR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.1006 | |
| 2 | P | A | -0.2998 | |
| 3 | T | A | -0.2344 | |
| 4 | T | A | -0.4993 | |
| 5 | T | A | -0.8367 | |
| 6 | T | A | -1.2139 | |
| 7 | K | A | -2.1317 | |
| 8 | V | A | -1.6249 | |
| 9 | D | A | -2.0475 | |
| 10 | I | A | -1.5245 | |
| 11 | A | A | -1.7154 | |
| 12 | A | A | -1.0351 | |
| 13 | F | A | 0.0000 | |
| 14 | N | A | 0.0000 | |
| 15 | P | A | -1.9194 | |
| 16 | D | A | -3.3219 | |
| 17 | K | A | -3.5415 | |
| 18 | D | A | -3.4692 | |
| 19 | G | A | -2.3102 | |
| 20 | T | A | -1.9775 | |
| 21 | I | A | 0.0000 | |
| 22 | E | A | -1.4285 | |
| 23 | L | A | -0.9934 | |
| 24 | K | A | -1.6252 | |
| 25 | E | A | 0.0000 | |
| 26 | A | A | 0.0000 | |
| 27 | L | A | -0.2059 | |
| 28 | A | A | -0.1798 | |
| 29 | A | A | -0.3047 | |
| 30 | A | A | 0.0000 | |
| 31 | S | A | -0.6898 | |
| 32 | A | A | -0.9171 | |
| 33 | A | A | 0.0000 | |
| 34 | F | A | 0.0000 | |
| 35 | D | A | -3.0379 | |
| 36 | K | A | -3.0373 | |
| 37 | L | A | 0.0000 | |
| 38 | D | A | 0.0000 | |
| 39 | P | A | -2.7325 | |
| 40 | D | A | -3.6891 | |
| 41 | K | A | -4.1083 | |
| 42 | D | A | -3.6206 | |
| 43 | G | A | -2.9030 | |
| 44 | T | A | -2.5540 | |
| 45 | L | A | 0.0000 | |
| 46 | E | A | -1.8473 | |
| 47 | A | A | -2.2981 | |
| 48 | K | A | -2.7245 | |
| 49 | E | A | -2.1089 | |
| 50 | L | A | 0.0000 | |
| 51 | K | A | -3.0886 | |
| 52 | G | A | -2.0796 | |
| 53 | R | A | -2.2155 | |
| 54 | V | A | -1.7061 | |
| 55 | S | A | -2.2911 | |
| 56 | E | A | -3.2142 | |
| 57 | A | A | -2.4805 | |
| 58 | D | A | -3.0809 | |
| 59 | L | A | -2.9130 | |
| 60 | K | A | -4.1858 | |
| 61 | K | A | -3.6963 | |
| 62 | A | A | -2.6899 | |
| 63 | D | A | 0.0000 | |
| 64 | P | A | -2.6107 | |
| 65 | D | A | -3.5592 | |
| 66 | N | A | -3.8266 | |
| 67 | D | A | -3.5990 | |
| 68 | G | A | -2.6104 | |
| 69 | T | A | -2.3381 | |
| 70 | L | A | 0.0000 | |
| 71 | E | A | -2.7554 | |
| 72 | K | A | -2.3380 | |
| 73 | K | A | -2.4437 | |
| 74 | E | A | -2.0291 | |
| 75 | Y | A | 0.0000 | |
| 76 | L | A | -0.7454 | |
| 77 | A | A | -0.7448 | |
| 78 | A | A | -0.8765 | |
| 79 | V | A | 0.0000 | |
| 80 | E | A | -1.0462 | |
| 81 | A | A | -0.8376 | |
| 82 | Q | A | -0.8426 | |
| 83 | F | A | 0.0000 | |
| 84 | K | A | -2.6052 | |
| 85 | A | A | -1.4044 | |
| 86 | A | A | 0.0000 | |
| 87 | N | A | 0.0000 | |
| 88 | P | A | -2.2147 | |
| 89 | D | A | -3.3740 | |
| 90 | N | A | -3.5574 | |
| 91 | D | A | -3.5105 | |
| 92 | G | A | -2.5104 | |
| 93 | T | A | -2.0579 | |
| 94 | I | A | 0.0000 | |
| 95 | E | A | -2.2890 | |
| 96 | A | A | -1.8971 | |
| 97 | R | A | -2.2835 | |
| 98 | E | A | -1.7592 | |
| 99 | L | A | 0.0000 | |
| 100 | A | A | -1.1550 | |
| 101 | S | A | -0.6358 | |
| 102 | P | A | -0.3028 | |
| 103 | A | A | -0.4946 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.2559 | |
| 106 | A | A | -0.4830 | |
| 107 | L | A | 0.0000 | |
| 108 | V | A | 0.0000 | |
| 109 | N | A | -1.2204 | |
| 110 | L | A | -0.7678 | |
| 111 | I | A | 0.0000 | |
| 112 | R | A | -2.1856 |