| Chain sequence(s) |
H: QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTYYAPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVGGNLFVYWGQGTLVTVSS
L: DVVMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:47)
[INFO] Main: Simulation completed successfully. (00:01:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3960 | |
| 2 | V | H | -0.9567 | |
| 3 | Q | H | -1.3777 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.6420 | |
| 6 | Q | H | -1.1164 | |
| 7 | S | H | -0.7162 | |
| 8 | G | H | -0.4516 | |
| 9 | A | H | 0.5071 | |
| 11 | E | H | 0.6188 | |
| 12 | L | H | 1.2716 | |
| 13 | V | H | -0.0751 | |
| 14 | K | H | -1.6288 | |
| 15 | P | H | -1.3701 | |
| 16 | G | H | -1.1214 | |
| 17 | A | H | -0.8648 | |
| 18 | S | H | -0.8974 | |
| 19 | V | H | -0.6141 | |
| 20 | K | H | -1.2373 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.5279 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.7398 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9514 | |
| 27 | G | H | -0.9527 | |
| 28 | F | H | -1.0545 | |
| 29 | N | H | -1.6663 | |
| 30 | I | H | 0.0000 | |
| 35 | K | H | -2.8320 | |
| 36 | D | H | -2.7797 | |
| 37 | T | H | -1.5004 | |
| 38 | Y | H | -0.6871 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | -0.1410 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.7727 | |
| 45 | R | H | -1.4044 | |
| 46 | P | H | -1.5379 | |
| 47 | E | H | -2.4440 | |
| 48 | Q | H | -2.0948 | |
| 49 | G | H | -1.3074 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9334 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | R | H | -0.1997 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -1.4897 | |
| 58 | P | H | 0.0000 | |
| 59 | A | H | -1.9516 | |
| 62 | N | H | -2.1096 | |
| 63 | G | H | -1.9197 | |
| 64 | N | H | -1.7937 | |
| 65 | T | H | -0.6742 | |
| 66 | Y | H | 0.3059 | |
| 67 | Y | H | 0.0868 | |
| 68 | A | H | 0.0000 | |
| 69 | P | H | -1.1182 | |
| 70 | K | H | -1.6762 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -1.7745 | |
| 74 | G | H | -1.3753 | |
| 75 | K | H | -1.2616 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.6343 | |
| 78 | I | H | 0.0000 | |
| 79 | T | H | -0.5559 | |
| 80 | A | H | -0.7271 | |
| 81 | D | H | -0.9849 | |
| 82 | T | H | -0.9944 | |
| 83 | S | H | -0.7616 | |
| 84 | S | H | -0.5839 | |
| 85 | N | H | -0.8593 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2405 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9835 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7786 | |
| 93 | S | H | -0.8464 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2039 | |
| 96 | S | H | -1.2578 | |
| 97 | E | H | -1.7938 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.2932 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.5009 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | G | H | 0.0000 | |
| 107 | G | H | -0.5869 | |
| 108 | N | H | -0.9353 | |
| 114 | L | H | 0.4693 | |
| 115 | F | H | 0.2828 | |
| 116 | V | H | 0.0000 | |
| 117 | Y | H | 0.0063 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.6202 | |
| 121 | G | H | -0.6086 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.1985 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3200 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5906 | |
| 128 | S | H | -0.7643 | |
| 1 | D | L | -1.1517 | |
| 2 | V | L | 0.0000 | |
| 3 | V | L | 0.7824 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.3739 | |
| 6 | Q | L | 0.0000 | |
| 7 | T | L | -0.1292 | |
| 8 | P | L | 0.3771 | |
| 9 | L | L | 1.1552 | |
| 10 | S | L | 0.1426 | |
| 11 | L | L | -0.0253 | |
| 12 | P | L | -0.6912 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -0.2409 | |
| 15 | L | L | 0.5322 | |
| 16 | G | L | -0.8329 | |
| 17 | D | L | -1.3174 | |
| 18 | Q | L | -1.9470 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -0.8452 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.7823 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.1770 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.7666 | |
| 27 | Q | L | -1.0151 | |
| 28 | S | L | -0.6644 | |
| 29 | I | L | 0.0000 | |
| 30 | V | L | 0.4236 | |
| 31 | H | L | -0.5728 | |
| 32 | S | L | -0.9698 | |
| 34 | N | L | -1.6311 | |
| 35 | G | L | -1.0807 | |
| 36 | N | L | -0.8686 | |
| 37 | T | L | -0.2865 | |
| 38 | Y | L | 0.0141 | |
| 39 | L | L | 0.0000 | |
| 40 | E | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | Q | L | -1.0153 | |
| 45 | K | L | -1.5321 | |
| 46 | P | L | -0.9225 | |
| 47 | G | L | -1.2179 | |
| 48 | Q | L | -1.6328 | |
| 49 | S | L | -1.2114 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3239 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.5130 | |
| 56 | K | L | -0.9832 | |
| 57 | V | L | -0.7906 | |
| 65 | S | L | -1.1512 | |
| 66 | N | L | -1.7603 | |
| 67 | R | L | -1.7860 | |
| 68 | F | L | -0.5766 | |
| 69 | S | L | -0.6008 | |
| 70 | G | L | -0.7732 | |
| 71 | V | L | -0.9355 | |
| 72 | P | L | -1.1105 | |
| 74 | D | L | -2.1247 | |
| 75 | R | L | 0.0000 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.2677 | |
| 78 | G | L | -0.9896 | |
| 79 | S | L | -0.9139 | |
| 80 | G | L | -0.9610 | |
| 83 | S | L | -0.6982 | |
| 84 | G | L | -0.6465 | |
| 85 | T | L | -1.3168 | |
| 86 | D | L | -1.9013 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.9298 | |
| 89 | L | L | 0.0000 | |
| 90 | K | L | -1.4202 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.9158 | |
| 93 | R | L | -1.9643 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -0.9847 | |
| 96 | A | L | -0.7100 | |
| 97 | E | L | -1.9978 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.5841 | |
| 100 | G | L | 0.0000 | |
| 101 | V | L | -0.2184 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | F | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | S | L | 0.0000 | |
| 109 | H | L | 0.3203 | |
| 114 | V | L | 1.3773 | |
| 115 | P | L | 0.4261 | |
| 116 | W | L | 0.5595 | |
| 117 | T | L | 0.0000 | |
| 118 | F | L | 0.1979 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.2981 | |
| 121 | G | L | -0.1859 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.7443 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.4364 | |
| 126 | L | L | 0.5864 | |
| 127 | K | L | -0.9680 |