Project name: 2510-8.pdb

Status: done

Started: 2026-03-11 09:56:59
Settings
Chain sequence(s) H: QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTYYAPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVGGNLFVYWGQGTLVTVSS
L: DVVMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:49)
Show buried residues

Minimal score value
-2.832
Maximal score value
1.3773
Average score
-0.5536
Total score value
-125.6632

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.3960
2 V H -0.9567
3 Q H -1.3777
4 L H 0.0000
5 Q H -1.6420
6 Q H -1.1164
7 S H -0.7162
8 G H -0.4516
9 A H 0.5071
11 E H 0.6188
12 L H 1.2716
13 V H -0.0751
14 K H -1.6288
15 P H -1.3701
16 G H -1.1214
17 A H -0.8648
18 S H -0.8974
19 V H -0.6141
20 K H -1.2373
21 L H 0.0000
22 S H -0.5279
23 C H 0.0000
24 T H -0.7398
25 A H 0.0000
26 S H -0.9514
27 G H -0.9527
28 F H -1.0545
29 N H -1.6663
30 I H 0.0000
35 K H -2.8320
36 D H -2.7797
37 T H -1.5004
38 Y H -0.6871
39 M H 0.0000
40 H H -0.1410
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.7727
45 R H -1.4044
46 P H -1.5379
47 E H -2.4440
48 Q H -2.0948
49 G H -1.3074
50 L H 0.0000
51 E H -0.9334
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.1997
56 I H 0.0000
57 D H -1.4897
58 P H 0.0000
59 A H -1.9516
62 N H -2.1096
63 G H -1.9197
64 N H -1.7937
65 T H -0.6742
66 Y H 0.3059
67 Y H 0.0868
68 A H 0.0000
69 P H -1.1182
70 K H -1.6762
71 F H 0.0000
72 Q H -1.7745
74 G H -1.3753
75 K H -1.2616
76 A H 0.0000
77 T H -0.6343
78 I H 0.0000
79 T H -0.5559
80 A H -0.7271
81 D H -0.9849
82 T H -0.9944
83 S H -0.7616
84 S H -0.5839
85 N H -0.8593
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2405
89 L H 0.0000
90 Q H -0.9835
91 L H 0.0000
92 S H -0.7786
93 S H -0.8464
94 L H 0.0000
95 T H -1.2039
96 S H -1.2578
97 E H -1.7938
98 D H 0.0000
99 T H -0.2932
100 A H 0.0000
101 V H 0.5009
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 V H 0.0000
106 G H 0.0000
107 G H -0.5869
108 N H -0.9353
114 L H 0.4693
115 F H 0.2828
116 V H 0.0000
117 Y H 0.0063
118 W H 0.0000
119 G H 0.0000
120 Q H -1.6202
121 G H -0.6086
122 T H 0.0000
123 L H 1.1985
124 V H 0.0000
125 T H 0.3200
126 V H 0.0000
127 S H -0.5906
128 S H -0.7643
1 D L -1.1517
2 V L 0.0000
3 V L 0.7824
4 M L 0.0000
5 T L -0.3739
6 Q L 0.0000
7 T L -0.1292
8 P L 0.3771
9 L L 1.1552
10 S L 0.1426
11 L L -0.0253
12 P L -0.6912
13 V L 0.0000
14 S L -0.2409
15 L L 0.5322
16 G L -0.8329
17 D L -1.3174
18 Q L -1.9470
19 A L 0.0000
20 S L -0.8452
21 I L 0.0000
22 S L -0.7823
23 C L 0.0000
24 R L -2.1770
25 S L 0.0000
26 S L -0.7666
27 Q L -1.0151
28 S L -0.6644
29 I L 0.0000
30 V L 0.4236
31 H L -0.5728
32 S L -0.9698
34 N L -1.6311
35 G L -1.0807
36 N L -0.8686
37 T L -0.2865
38 Y L 0.0141
39 L L 0.0000
40 E L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 L L 0.0000
44 Q L -1.0153
45 K L -1.5321
46 P L -0.9225
47 G L -1.2179
48 Q L -1.6328
49 S L -1.2114
50 P L 0.0000
51 K L -1.3239
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.5130
56 K L -0.9832
57 V L -0.7906
65 S L -1.1512
66 N L -1.7603
67 R L -1.7860
68 F L -0.5766
69 S L -0.6008
70 G L -0.7732
71 V L -0.9355
72 P L -1.1105
74 D L -2.1247
75 R L 0.0000
76 F L 0.0000
77 S L -1.2677
78 G L -0.9896
79 S L -0.9139
80 G L -0.9610
83 S L -0.6982
84 G L -0.6465
85 T L -1.3168
86 D L -1.9013
87 F L 0.0000
88 T L -0.9298
89 L L 0.0000
90 K L -1.4202
91 I L 0.0000
92 S L -1.9158
93 R L -1.9643
94 V L 0.0000
95 E L -0.9847
96 A L -0.7100
97 E L -1.9978
98 D L 0.0000
99 L L -0.5841
100 G L 0.0000
101 V L -0.2184
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 F L 0.0000
106 Q L 0.0000
107 G L 0.0000
108 S L 0.0000
109 H L 0.3203
114 V L 1.3773
115 P L 0.4261
116 W L 0.5595
117 T L 0.0000
118 F L 0.1979
119 G L 0.0000
120 G L -0.2981
121 G L -0.1859
122 T L 0.0000
123 K L -0.7443
124 L L 0.0000
125 E L -0.4364
126 L L 0.5864
127 K L -0.9680
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Laboratory of Theory of Biopolymers 2018