| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVHYYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYALYGSLYYDYPSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:14)
[INFO] Main: Simulation completed successfully. (00:01:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7926 | |
| 2 | S | A | 0.7689 | |
| 3 | S | A | 0.6912 | |
| 4 | V | A | 0.4685 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6937 | |
| 7 | K | A | -2.6898 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9238 | |
| 10 | V | A | 0.0974 | |
| 11 | V | A | 1.5376 | |
| 12 | A | A | 0.8967 | |
| 13 | A | A | 0.3208 | |
| 14 | T | A | -0.3368 | |
| 15 | P | A | -1.1167 | |
| 16 | T | A | -0.9901 | |
| 17 | S | A | -0.5254 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7502 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9799 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6937 | |
| 24 | A | A | -1.3021 | |
| 25 | P | A | 0.0459 | |
| 26 | A | A | 0.4484 | |
| 27 | V | A | 0.7727 | |
| 28 | T | A | 0.0908 | |
| 29 | V | A | 0.0000 | |
| 30 | H | A | -0.7135 | |
| 31 | Y | A | 0.0507 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.4896 | |
| 36 | Y | A | -0.3682 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.7263 | |
| 39 | T | A | -1.4067 | |
| 40 | G | A | -1.3092 | |
| 41 | G | A | -1.4842 | |
| 42 | N | A | -1.5548 | |
| 43 | S | A | -0.8871 | |
| 44 | P | A | -0.3876 | |
| 45 | V | A | 0.3292 | |
| 46 | Q | A | -1.0445 | |
| 47 | E | A | -1.6455 | |
| 48 | F | A | -0.6183 | |
| 49 | T | A | 0.0090 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.6829 | |
| 52 | G | A | -0.7528 | |
| 53 | S | A | -1.1880 | |
| 54 | K | A | -2.0896 | |
| 55 | S | A | -1.3727 | |
| 56 | T | A | -0.7698 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2412 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6587 | |
| 61 | G | A | -1.0274 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.4208 | |
| 64 | P | A | -1.7075 | |
| 65 | G | A | -1.5407 | |
| 66 | V | A | -1.6078 | |
| 67 | D | A | -2.5163 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8750 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.0996 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.5801 | |
| 74 | A | A | 0.0000 | |
| 75 | L | A | 0.8864 | |
| 76 | Y | A | 0.6874 | |
| 77 | G | A | 0.3552 | |
| 78 | S | A | 0.7009 | |
| 79 | L | A | 2.1321 | |
| 80 | Y | A | 2.3203 | |
| 81 | Y | A | 1.7154 | |
| 82 | D | A | -0.1512 | |
| 83 | Y | A | 0.6619 | |
| 84 | P | A | 0.0000 | |
| 85 | S | A | -0.2217 | |
| 86 | P | A | 0.1033 | |
| 87 | I | A | 0.0324 | |
| 88 | S | A | -0.5505 | |
| 89 | I | A | -0.7231 | |
| 90 | N | A | -1.8359 | |
| 91 | Y | A | -1.6146 | |
| 92 | R | A | -2.7107 | |
| 93 | T | A | -1.7288 |