| Chain sequence(s) |
A: EPKSSDKTHTPPRTEVQLVESGGGLVQPGGSLRLSCAASLEHVAIGWFRQAPGKEREGVSCISSSGGHIHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVSYWECYDKLDYWGQGTLVTVSSPP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.8786 | |
| 2 | P | A | -0.9852 | |
| 3 | K | A | -1.7860 | |
| 4 | S | A | -0.5670 | |
| 5 | S | A | -0.5849 | |
| 6 | D | A | -2.1423 | |
| 7 | K | A | -2.0430 | |
| 8 | T | A | -0.5697 | |
| 9 | H | A | -1.0164 | |
| 10 | T | A | -0.3027 | |
| 11 | P | A | -0.3140 | |
| 12 | P | A | -0.6360 | |
| 13 | R | A | -1.9033 | |
| 14 | T | A | -0.7444 | |
| 15 | E | A | -1.7838 | |
| 16 | V | A | -0.2179 | |
| 17 | Q | A | -0.7870 | |
| 18 | L | A | 0.0000 | |
| 19 | V | A | 1.7393 | |
| 20 | E | A | 0.1169 | |
| 21 | S | A | -0.2386 | |
| 22 | G | A | -0.3676 | |
| 23 | G | A | -0.2715 | |
| 24 | G | A | 0.0710 | |
| 25 | L | A | 1.5504 | |
| 26 | V | A | 0.2708 | |
| 27 | Q | A | -1.1890 | |
| 28 | P | A | -0.4638 | |
| 29 | G | A | -0.5274 | |
| 30 | G | A | -0.1727 | |
| 31 | S | A | -0.2326 | |
| 32 | L | A | -0.1189 | |
| 33 | R | A | -1.8831 | |
| 34 | L | A | 0.0000 | |
| 35 | S | A | -0.0202 | |
| 36 | C | A | 0.0000 | |
| 37 | A | A | 0.0301 | |
| 38 | A | A | -0.0154 | |
| 39 | S | A | -0.0791 | |
| 40 | L | A | 0.0397 | |
| 41 | E | A | -1.9245 | |
| 42 | H | A | -1.3209 | |
| 43 | V | A | 0.0000 | |
| 44 | A | A | 0.0000 | |
| 45 | I | A | 0.0000 | |
| 46 | G | A | 0.0000 | |
| 47 | W | A | 0.0000 | |
| 48 | F | A | 0.2202 | |
| 49 | R | A | 0.0000 | |
| 50 | Q | A | -0.5867 | |
| 51 | A | A | -0.1201 | |
| 52 | P | A | -0.3376 | |
| 53 | G | A | -0.8147 | |
| 54 | K | A | -2.1211 | |
| 55 | E | A | -2.3399 | |
| 56 | R | A | -1.6340 | |
| 57 | E | A | -0.9526 | |
| 58 | G | A | -0.1971 | |
| 59 | V | A | 0.0000 | |
| 60 | S | A | 0.0000 | |
| 61 | C | A | 0.0000 | |
| 62 | I | A | 0.0000 | |
| 63 | S | A | 0.0000 | |
| 64 | S | A | -0.1851 | |
| 65 | S | A | -0.2475 | |
| 66 | G | A | -0.2721 | |
| 67 | G | A | -0.6718 | |
| 68 | H | A | -0.9027 | |
| 69 | I | A | 0.5783 | |
| 70 | H | A | -0.7667 | |
| 71 | Y | A | 0.0976 | |
| 72 | A | A | -0.2629 | |
| 73 | D | A | -1.8179 | |
| 74 | S | A | -0.4908 | |
| 75 | V | A | 0.0000 | |
| 76 | K | A | -1.7846 | |
| 77 | G | A | -0.8352 | |
| 78 | R | A | -0.4238 | |
| 79 | F | A | 0.0000 | |
| 80 | T | A | -0.1163 | |
| 81 | I | A | 0.0000 | |
| 82 | S | A | -0.1649 | |
| 83 | R | A | -0.4049 | |
| 84 | D | A | -0.7980 | |
| 85 | N | A | -1.4562 | |
| 86 | S | A | -0.7455 | |
| 87 | K | A | -1.8146 | |
| 88 | N | A | -0.8864 | |
| 89 | T | A | 0.0000 | |
| 90 | V | A | 0.0000 | |
| 91 | Y | A | 0.1437 | |
| 92 | L | A | 0.0000 | |
| 93 | Q | A | -0.8895 | |
| 94 | M | A | 0.0000 | |
| 95 | N | A | -1.1903 | |
| 96 | S | A | -0.4053 | |
| 97 | L | A | 0.0000 | |
| 98 | R | A | -1.8334 | |
| 99 | A | A | -0.6030 | |
| 100 | E | A | -1.8095 | |
| 101 | D | A | 0.0000 | |
| 102 | T | A | -0.0166 | |
| 103 | A | A | 0.0000 | |
| 104 | V | A | 0.7383 | |
| 105 | Y | A | 0.0000 | |
| 106 | Y | A | 0.1433 | |
| 107 | C | A | 0.0000 | |
| 108 | A | A | 0.0000 | |
| 109 | A | A | 0.0000 | |
| 110 | A | A | 0.0000 | |
| 111 | V | A | 1.7626 | |
| 112 | S | A | 0.4533 | |
| 113 | Y | A | 1.2680 | |
| 114 | W | A | 1.1573 | |
| 115 | E | A | -1.0089 | |
| 116 | C | A | 0.0000 | |
| 117 | Y | A | 0.3822 | |
| 118 | D | A | -1.9685 | |
| 119 | K | A | -1.9882 | |
| 120 | L | A | -0.4616 | |
| 121 | D | A | -1.6902 | |
| 122 | Y | A | 0.1356 | |
| 123 | W | A | 0.5511 | |
| 124 | G | A | -0.1858 | |
| 125 | Q | A | -1.2269 | |
| 126 | G | A | -0.2931 | |
| 127 | T | A | 0.2557 | |
| 128 | L | A | 1.6193 | |
| 129 | V | A | 0.0000 | |
| 130 | T | A | 0.1605 | |
| 131 | V | A | 0.0000 | |
| 132 | S | A | -0.1474 | |
| 133 | S | A | -0.2792 | |
| 134 | P | A | -0.3399 | |
| 135 | P | A | -0.3012 |