Project name: EPKSSDKTHTPPRT-141VHH

Status: done

Started: 2025-11-18 02:01:52
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Chain sequence(s) A: EPKSSDKTHTPPRTEVQLVESGGGLVQPGGSLRLSCAASLEHVAIGWFRQAPGKEREGVSCISSSGGHIHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVSYWECYDKLDYWGQGTLVTVSSPP
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:45)
Show buried residues

Minimal score value
-2.3399
Maximal score value
1.7626
Average score
-0.4029
Total score value
-54.3925

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.8786
2 P A -0.9852
3 K A -1.7860
4 S A -0.5670
5 S A -0.5849
6 D A -2.1423
7 K A -2.0430
8 T A -0.5697
9 H A -1.0164
10 T A -0.3027
11 P A -0.3140
12 P A -0.6360
13 R A -1.9033
14 T A -0.7444
15 E A -1.7838
16 V A -0.2179
17 Q A -0.7870
18 L A 0.0000
19 V A 1.7393
20 E A 0.1169
21 S A -0.2386
22 G A -0.3676
23 G A -0.2715
24 G A 0.0710
25 L A 1.5504
26 V A 0.2708
27 Q A -1.1890
28 P A -0.4638
29 G A -0.5274
30 G A -0.1727
31 S A -0.2326
32 L A -0.1189
33 R A -1.8831
34 L A 0.0000
35 S A -0.0202
36 C A 0.0000
37 A A 0.0301
38 A A -0.0154
39 S A -0.0791
40 L A 0.0397
41 E A -1.9245
42 H A -1.3209
43 V A 0.0000
44 A A 0.0000
45 I A 0.0000
46 G A 0.0000
47 W A 0.0000
48 F A 0.2202
49 R A 0.0000
50 Q A -0.5867
51 A A -0.1201
52 P A -0.3376
53 G A -0.8147
54 K A -2.1211
55 E A -2.3399
56 R A -1.6340
57 E A -0.9526
58 G A -0.1971
59 V A 0.0000
60 S A 0.0000
61 C A 0.0000
62 I A 0.0000
63 S A 0.0000
64 S A -0.1851
65 S A -0.2475
66 G A -0.2721
67 G A -0.6718
68 H A -0.9027
69 I A 0.5783
70 H A -0.7667
71 Y A 0.0976
72 A A -0.2629
73 D A -1.8179
74 S A -0.4908
75 V A 0.0000
76 K A -1.7846
77 G A -0.8352
78 R A -0.4238
79 F A 0.0000
80 T A -0.1163
81 I A 0.0000
82 S A -0.1649
83 R A -0.4049
84 D A -0.7980
85 N A -1.4562
86 S A -0.7455
87 K A -1.8146
88 N A -0.8864
89 T A 0.0000
90 V A 0.0000
91 Y A 0.1437
92 L A 0.0000
93 Q A -0.8895
94 M A 0.0000
95 N A -1.1903
96 S A -0.4053
97 L A 0.0000
98 R A -1.8334
99 A A -0.6030
100 E A -1.8095
101 D A 0.0000
102 T A -0.0166
103 A A 0.0000
104 V A 0.7383
105 Y A 0.0000
106 Y A 0.1433
107 C A 0.0000
108 A A 0.0000
109 A A 0.0000
110 A A 0.0000
111 V A 1.7626
112 S A 0.4533
113 Y A 1.2680
114 W A 1.1573
115 E A -1.0089
116 C A 0.0000
117 Y A 0.3822
118 D A -1.9685
119 K A -1.9882
120 L A -0.4616
121 D A -1.6902
122 Y A 0.1356
123 W A 0.5511
124 G A -0.1858
125 Q A -1.2269
126 G A -0.2931
127 T A 0.2557
128 L A 1.6193
129 V A 0.0000
130 T A 0.1605
131 V A 0.0000
132 S A -0.1474
133 S A -0.2792
134 P A -0.3399
135 P A -0.3012
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Laboratory of Theory of Biopolymers 2018