| Chain sequence(s) |
A: MGSHHHHHHMKKDDQIAAAIALRGMAKDGKFAVKEAAAKMQKKNQIAAAIVLRGLAKDGKFANTEAAAKMKKSDKIAAAIVLRGLAKDGKFAAAEAAAKQNKNDQIAAAIVLRGLAKGGKFANAEAAAKKKKNDQIAAALVLRGVAKSGKFAGAEAAAKITRNDEIAAAIVLRGMAKGGRFFASGGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:28)
[INFO] Main: Simulation completed successfully. (00:05:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5269 | |
| 2 | G | A | -0.8122 | |
| 3 | S | A | -1.6442 | |
| 4 | H | A | -2.3232 | |
| 5 | H | A | -2.8617 | |
| 6 | H | A | -2.7968 | |
| 7 | H | A | -3.0805 | |
| 8 | H | A | -3.7529 | |
| 9 | H | A | -3.9916 | |
| 10 | M | A | -3.5078 | |
| 11 | K | A | -4.7472 | |
| 12 | K | A | -4.8970 | |
| 13 | D | A | -4.3113 | |
| 14 | D | A | -3.8907 | |
| 15 | Q | A | -2.9525 | |
| 16 | I | A | -1.2520 | |
| 17 | A | A | 0.0000 | |
| 18 | A | A | -0.8527 | |
| 19 | A | A | 0.2471 | |
| 20 | I | A | 1.6782 | |
| 21 | A | A | 0.9974 | |
| 22 | L | A | 0.3157 | |
| 23 | R | A | -0.6384 | |
| 24 | G | A | 0.0000 | |
| 25 | M | A | -1.1917 | |
| 26 | A | A | -1.1985 | |
| 27 | K | A | -2.9429 | |
| 28 | D | A | -3.1341 | |
| 29 | G | A | -2.3749 | |
| 30 | K | A | -2.6159 | |
| 31 | F | A | -1.8313 | |
| 32 | A | A | -1.2412 | |
| 33 | V | A | -0.7786 | |
| 34 | K | A | -1.6162 | |
| 35 | E | A | -1.5000 | |
| 36 | A | A | 0.0000 | |
| 37 | A | A | -0.9169 | |
| 38 | A | A | -1.0842 | |
| 39 | K | A | 0.0000 | |
| 40 | M | A | -1.3258 | |
| 41 | Q | A | -1.8202 | |
| 42 | K | A | -1.8198 | |
| 43 | K | A | -2.7963 | |
| 44 | N | A | -2.1018 | |
| 45 | Q | A | 0.0000 | |
| 46 | I | A | 0.0000 | |
| 47 | A | A | -0.2648 | |
| 48 | A | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | V | A | 0.6052 | |
| 52 | L | A | -0.4871 | |
| 53 | R | A | -1.2479 | |
| 54 | G | A | -1.0294 | |
| 55 | L | A | -0.1778 | |
| 56 | A | A | -1.5808 | |
| 57 | K | A | -2.6796 | |
| 58 | D | A | -2.8705 | |
| 59 | G | A | -2.5652 | |
| 60 | K | A | -2.3956 | |
| 61 | F | A | -1.3449 | |
| 62 | A | A | -1.4140 | |
| 63 | N | A | -1.6528 | |
| 64 | T | A | -1.4093 | |
| 65 | E | A | -2.3023 | |
| 66 | A | A | -1.3366 | |
| 67 | A | A | 0.0000 | |
| 68 | A | A | -1.7740 | |
| 69 | K | A | -2.3858 | |
| 70 | M | A | 0.0000 | |
| 71 | K | A | -2.3364 | |
| 72 | K | A | -1.4203 | |
| 73 | S | A | -0.8396 | |
| 74 | D | A | -0.7051 | |
| 75 | K | A | 0.0000 | |
| 76 | I | A | 0.7258 | |
| 77 | A | A | 0.6506 | |
| 78 | A | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | I | A | 1.3991 | |
| 81 | V | A | 0.9937 | |
| 82 | L | A | 0.0000 | |
| 83 | R | A | -1.2361 | |
| 84 | G | A | -0.5905 | |
| 85 | L | A | 0.5125 | |
| 86 | A | A | -1.1192 | |
| 87 | K | A | -2.7411 | |
| 88 | D | A | -3.2478 | |
| 89 | G | A | -2.4519 | |
| 90 | K | A | -1.7565 | |
| 91 | F | A | 0.9350 | |
| 92 | A | A | 0.5315 | |
| 93 | A | A | 0.6453 | |
| 94 | A | A | 0.0000 | |
| 95 | E | A | -0.8551 | |
| 96 | A | A | -1.0573 | |
| 97 | A | A | -0.9681 | |
| 98 | A | A | -1.2313 | |
| 99 | K | A | -2.3407 | |
| 100 | Q | A | 0.0000 | |
| 101 | N | A | -2.5115 | |
| 102 | K | A | -2.2853 | |
| 103 | N | A | -2.0536 | |
| 104 | D | A | -1.9966 | |
| 105 | Q | A | -1.6828 | |
| 106 | I | A | 0.0000 | |
| 107 | A | A | 0.0000 | |
| 108 | A | A | 0.0000 | |
| 109 | A | A | 0.0000 | |
| 110 | I | A | 0.0000 | |
| 111 | V | A | 0.0000 | |
| 112 | L | A | 0.0000 | |
| 113 | R | A | -0.9814 | |
| 114 | G | A | 0.0000 | |
| 115 | L | A | 0.4166 | |
| 116 | A | A | 0.0000 | |
| 117 | K | A | -2.0299 | |
| 118 | G | A | -1.7509 | |
| 119 | G | A | -1.7630 | |
| 120 | K | A | -1.8161 | |
| 121 | F | A | -0.0573 | |
| 122 | A | A | -0.6010 | |
| 123 | N | A | -1.5522 | |
| 124 | A | A | -1.2928 | |
| 125 | E | A | -2.5157 | |
| 126 | A | A | 0.0000 | |
| 127 | A | A | -0.9227 | |
| 128 | A | A | 0.0000 | |
| 129 | K | A | -1.2078 | |
| 130 | K | A | -0.4881 | |
| 131 | K | A | -0.4425 | |
| 132 | K | A | 0.0000 | |
| 133 | N | A | 0.0000 | |
| 134 | D | A | 0.0000 | |
| 135 | Q | A | 0.0000 | |
| 136 | I | A | 0.0000 | |
| 137 | A | A | 0.0000 | |
| 138 | A | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | L | A | 0.5311 | |
| 141 | V | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | R | A | 0.0000 | |
| 144 | G | A | -0.6011 | |
| 145 | V | A | 0.2133 | |
| 146 | A | A | -1.3539 | |
| 147 | K | A | -2.3484 | |
| 148 | S | A | -1.8454 | |
| 149 | G | A | 0.0000 | |
| 150 | K | A | -1.1723 | |
| 151 | F | A | 0.0000 | |
| 152 | A | A | -0.9341 | |
| 153 | G | A | -1.5619 | |
| 154 | A | A | -1.9477 | |
| 155 | E | A | -2.6312 | |
| 156 | A | A | -1.8337 | |
| 157 | A | A | -2.4465 | |
| 158 | A | A | -2.4457 | |
| 159 | K | A | -3.0996 | |
| 160 | I | A | 0.0000 | |
| 161 | T | A | 0.0000 | |
| 162 | R | A | -2.8763 | |
| 163 | N | A | -1.8741 | |
| 164 | D | A | -0.8426 | |
| 165 | E | A | 0.0000 | |
| 166 | I | A | 0.8450 | |
| 167 | A | A | 0.6570 | |
| 168 | A | A | 0.0000 | |
| 169 | A | A | 0.9851 | |
| 170 | I | A | 1.8663 | |
| 171 | V | A | 0.0000 | |
| 172 | L | A | -0.0697 | |
| 173 | R | A | -1.5087 | |
| 174 | G | A | -1.3903 | |
| 175 | M | A | -1.2862 | |
| 176 | A | A | -1.3499 | |
| 177 | K | A | -2.5463 | |
| 178 | G | A | -2.1050 | |
| 179 | G | A | -2.2283 | |
| 180 | R | A | -2.5721 | |
| 181 | F | A | -0.5407 | |
| 182 | F | A | -0.5313 | |
| 183 | A | A | -0.2873 | |
| 184 | S | A | -0.5951 | |
| 185 | G | A | -1.1254 | |
| 186 | G | A | -0.8023 | |
| 187 | G | A | -0.8028 |