| Chain sequence(s) |
A: MSHHHHHHSGSELEKKLPKEEILEKLREYVKKHAEVIRALNKVAHEYRRRQYNGDNSKIDLIKEFPEVTLEDLVDFYTEYTKLKKWLEKYYPNVEEFGWIYRMVDHTMRMLEYITDETRKKIEEEAKKKLNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:09)
[INFO] Main: Simulation completed successfully. (00:07:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5555 | |
| 2 | S | A | -0.6124 | |
| 3 | H | A | -1.7342 | |
| 4 | H | A | -2.3320 | |
| 5 | H | A | -2.7436 | |
| 6 | H | A | -2.7513 | |
| 7 | H | A | -2.5651 | |
| 8 | H | A | -2.2342 | |
| 9 | S | A | -1.7450 | |
| 10 | G | A | -1.4808 | |
| 11 | S | A | -1.3451 | |
| 12 | E | A | -2.2058 | |
| 13 | L | A | -1.1414 | |
| 14 | E | A | -2.8346 | |
| 15 | K | A | -3.1705 | |
| 16 | K | A | -3.0424 | |
| 17 | L | A | -2.2194 | |
| 18 | P | A | -2.0592 | |
| 19 | K | A | -2.5821 | |
| 20 | E | A | -3.1775 | |
| 21 | E | A | -3.2628 | |
| 22 | I | A | 0.0000 | |
| 23 | L | A | -2.4097 | |
| 24 | E | A | -3.2403 | |
| 25 | K | A | -2.8667 | |
| 26 | L | A | 0.0000 | |
| 27 | R | A | -2.9894 | |
| 28 | E | A | -3.5111 | |
| 29 | Y | A | 0.0000 | |
| 30 | V | A | -2.3476 | |
| 31 | K | A | -3.5431 | |
| 32 | K | A | -3.5940 | |
| 33 | H | A | -2.9872 | |
| 34 | A | A | -2.6128 | |
| 35 | E | A | -3.4311 | |
| 36 | V | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | R | A | -3.1603 | |
| 39 | A | A | 0.0000 | |
| 40 | L | A | 0.0000 | |
| 41 | N | A | -2.3907 | |
| 42 | K | A | -2.7045 | |
| 43 | V | A | 0.0000 | |
| 44 | A | A | -2.1933 | |
| 45 | H | A | -2.6732 | |
| 46 | E | A | -2.3149 | |
| 47 | Y | A | 0.0000 | |
| 48 | R | A | -2.9757 | |
| 49 | R | A | -3.2250 | |
| 50 | R | A | -2.8997 | |
| 51 | Q | A | -2.4744 | |
| 52 | Y | A | -1.0370 | |
| 53 | N | A | -2.1574 | |
| 54 | G | A | -2.0365 | |
| 55 | D | A | -2.6893 | |
| 56 | N | A | -2.6348 | |
| 57 | S | A | -1.6024 | |
| 58 | K | A | -1.9688 | |
| 59 | I | A | 0.0000 | |
| 60 | D | A | -1.6145 | |
| 61 | L | A | 0.0000 | |
| 62 | I | A | -0.5783 | |
| 63 | K | A | -1.9687 | |
| 64 | E | A | -1.6789 | |
| 65 | F | A | -1.4186 | |
| 66 | P | A | -1.2171 | |
| 67 | E | A | -2.2502 | |
| 68 | V | A | 0.0000 | |
| 69 | T | A | -1.1237 | |
| 70 | L | A | -1.2446 | |
| 71 | E | A | -2.7076 | |
| 72 | D | A | -2.7333 | |
| 73 | L | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | D | A | -2.9838 | |
| 76 | F | A | 0.0000 | |
| 77 | Y | A | -1.4275 | |
| 78 | T | A | 0.0000 | |
| 79 | E | A | -2.0215 | |
| 80 | Y | A | 0.0000 | |
| 81 | T | A | -1.7060 | |
| 82 | K | A | -2.1194 | |
| 83 | L | A | -2.0345 | |
| 84 | K | A | -2.5651 | |
| 85 | K | A | -3.3489 | |
| 86 | W | A | 0.0000 | |
| 87 | L | A | 0.0000 | |
| 88 | E | A | -3.5411 | |
| 89 | K | A | -3.2830 | |
| 90 | Y | A | -2.4645 | |
| 91 | Y | A | 0.0000 | |
| 92 | P | A | -2.0808 | |
| 93 | N | A | -2.3345 | |
| 94 | V | A | -2.2212 | |
| 95 | E | A | -2.7359 | |
| 96 | E | A | -1.9749 | |
| 97 | F | A | 0.0000 | |
| 98 | G | A | -0.8286 | |
| 99 | W | A | 0.1134 | |
| 100 | I | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | R | A | -1.8807 | |
| 103 | M | A | -0.6332 | |
| 104 | V | A | 0.0000 | |
| 105 | D | A | 0.0000 | |
| 106 | H | A | -2.0626 | |
| 107 | T | A | 0.0000 | |
| 108 | M | A | -1.5065 | |
| 109 | R | A | -2.6260 | |
| 110 | M | A | 0.0000 | |
| 111 | L | A | 0.0000 | |
| 112 | E | A | -2.7258 | |
| 113 | Y | A | -2.0054 | |
| 114 | I | A | 0.0000 | |
| 115 | T | A | -2.4565 | |
| 116 | D | A | -3.9160 | |
| 117 | E | A | -3.7307 | |
| 118 | T | A | 0.0000 | |
| 119 | R | A | -3.5764 | |
| 120 | K | A | -4.4286 | |
| 121 | K | A | -4.1091 | |
| 122 | I | A | 0.0000 | |
| 123 | E | A | -3.5435 | |
| 124 | E | A | -4.4284 | |
| 125 | E | A | -4.0976 | |
| 126 | A | A | 0.0000 | |
| 127 | K | A | -3.7701 | |
| 128 | K | A | -4.0328 | |
| 129 | K | A | -3.5198 | |
| 130 | L | A | -2.4642 | |
| 131 | N | A | -2.4255 | |
| 132 | S | A | -1.7175 |