| Chain sequence(s) |
A: TCIGHYQKCVNADKPCCSKTVRYGDSKNVRKFICDRDGEGVCVPFDG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 6 | T | A | -0.0937 | |
| 7 | C | A | 0.0671 | |
| 8 | I | A | -0.1098 | |
| 9 | G | A | -0.5870 | |
| 10 | H | A | -0.6610 | |
| 11 | Y | A | 0.3083 | |
| 12 | Q | A | -1.1720 | |
| 13 | K | A | -2.2191 | |
| 14 | C | A | 0.0000 | |
| 15 | V | A | -1.0762 | |
| 16 | N | A | -1.6722 | |
| 17 | A | A | -1.7451 | |
| 18 | D | A | -2.5788 | |
| 19 | K | A | -2.3427 | |
| 20 | P | A | -1.2137 | |
| 21 | C | A | -0.1511 | |
| 22 | C | A | -0.5229 | |
| 23 | S | A | -0.8316 | |
| 24 | K | A | -2.0270 | |
| 25 | T | A | -1.1123 | |
| 26 | V | A | -0.0999 | |
| 27 | R | A | -1.6232 | |
| 28 | Y | A | -0.3841 | |
| 29 | G | A | -1.2806 | |
| 30 | D | A | -2.4100 | |
| 31 | S | A | -2.1426 | |
| 32 | K | A | -2.5872 | |
| 33 | N | A | -2.3142 | |
| 34 | V | A | -1.2938 | |
| 35 | R | A | -1.7450 | |
| 36 | K | A | -1.4265 | |
| 37 | F | A | 0.0000 | |
| 38 | I | A | 0.4396 | |
| 39 | C | A | -0.8606 | |
| 40 | D | A | -2.0954 | |
| 41 | R | A | -3.5290 | |
| 42 | D | A | -3.5051 | |
| 43 | G | A | -2.9651 | |
| 44 | E | A | -3.2298 | |
| 45 | G | A | 0.0000 | |
| 46 | V | A | -1.8502 | |
| 47 | C | A | 0.0000 | |
| 48 | V | A | 0.6263 | |
| 49 | P | A | 0.0222 | |
| 50 | F | A | 0.7347 | |
| 51 | D | A | -1.4806 | |
| 52 | G | A | -1.3267 |