Project name: query_structure

Status: done

Started: 2026-03-17 01:04:36
Settings
Chain sequence(s) A: TCIGHYQKCVNADKPCCSKTVRYGDSKNVRKFICDRDGEGVCVPFDG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-3.529
Maximal score value
0.7347
Average score
-1.1929
Total score value
-56.0676

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
6 T A -0.0937
7 C A 0.0671
8 I A -0.1098
9 G A -0.5870
10 H A -0.6610
11 Y A 0.3083
12 Q A -1.1720
13 K A -2.2191
14 C A 0.0000
15 V A -1.0762
16 N A -1.6722
17 A A -1.7451
18 D A -2.5788
19 K A -2.3427
20 P A -1.2137
21 C A -0.1511
22 C A -0.5229
23 S A -0.8316
24 K A -2.0270
25 T A -1.1123
26 V A -0.0999
27 R A -1.6232
28 Y A -0.3841
29 G A -1.2806
30 D A -2.4100
31 S A -2.1426
32 K A -2.5872
33 N A -2.3142
34 V A -1.2938
35 R A -1.7450
36 K A -1.4265
37 F A 0.0000
38 I A 0.4396
39 C A -0.8606
40 D A -2.0954
41 R A -3.5290
42 D A -3.5051
43 G A -2.9651
44 E A -3.2298
45 G A 0.0000
46 V A -1.8502
47 C A 0.0000
48 V A 0.6263
49 P A 0.0222
50 F A 0.7347
51 D A -1.4806
52 G A -1.3267
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Laboratory of Theory of Biopolymers 2018