Project name: query_structure

Status: done

Started: 2026-03-17 01:27:25
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVHYVITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYALLSSSHWVYESPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:45)
Show buried residues

Minimal score value
-2.5721
Maximal score value
1.8351
Average score
-0.3183
Total score value
-29.6047

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8351
2 S A 0.7752
3 S A 0.5913
4 V A 0.2806
5 P A 0.0000
6 T A -1.5056
7 K A -2.5721
8 L A 0.0000
9 E A -1.8959
10 V A 0.0920
11 V A 1.5371
12 A A 0.8953
13 A A 0.2949
14 T A -0.3908
15 P A -0.8365
16 T A -0.5594
17 S A -0.3257
18 L A 0.0000
19 L A 0.7561
20 I A 0.0000
21 S A -0.8132
22 W A 0.0000
23 D A -2.3376
24 A A -0.9937
25 P A 0.1641
26 A A 0.5569
27 V A 1.0822
28 T A 0.4383
29 V A 0.0000
30 V A 0.6206
31 H A -0.2249
32 Y A 0.0000
33 V A 0.0000
34 I A 0.0000
35 T A -0.4923
36 Y A 0.0000
37 G A 0.0000
38 E A -1.4184
39 T A -1.3100
40 G A -1.3853
41 G A -1.2702
42 N A -1.6684
43 S A -0.8367
44 P A -0.2729
45 V A 0.4770
46 Q A -0.7582
47 E A -1.5309
48 F A -0.5882
49 T A -0.3272
50 V A 0.0000
51 P A -0.5803
52 G A -0.4346
53 S A -0.7722
54 K A -1.4582
55 S A -1.1284
56 T A -0.5356
57 A A 0.0000
58 T A 0.3007
59 I A 0.0000
60 S A -0.4761
61 G A -0.6899
62 L A 0.0000
63 S A -0.8715
64 P A -1.0288
65 G A -1.1299
66 V A -1.0144
67 D A -1.8210
68 Y A 0.0000
69 T A -0.7899
70 I A 0.0000
71 T A -0.1301
72 V A 0.0000
73 Y A 0.3550
74 A A 0.0000
75 L A 0.0000
76 L A 0.7397
77 S A 0.2490
78 S A -0.0388
79 S A -0.3663
80 H A -0.1374
81 W A 1.1738
82 V A 1.2424
83 Y A 1.0736
84 E A 0.3168
85 S A -0.0589
86 P A 0.0341
87 I A 0.0564
88 S A -0.3478
89 I A -0.5499
90 N A -1.7464
91 Y A -1.5043
92 R A -2.3838
93 T A -1.2343
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Laboratory of Theory of Biopolymers 2018