| Chain sequence(s) |
A: MRWQEMGYIFYPRKLR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2819 | |
| 2 | R | A | -1.3372 | |
| 3 | W | A | -0.3730 | |
| 4 | Q | A | -1.6295 | |
| 5 | E | A | -1.8094 | |
| 6 | M | A | 0.3949 | |
| 7 | G | A | 0.6866 | |
| 8 | Y | A | 2.7488 | |
| 9 | I | A | 3.9969 | |
| 10 | F | A | 3.4758 | |
| 11 | Y | A | 2.1526 | |
| 12 | P | A | 0.0124 | |
| 13 | R | A | -1.9798 | |
| 14 | K | A | -2.2501 | |
| 15 | L | A | -0.7141 | |
| 16 | R | A | -1.8004 |