| Chain sequence(s) |
A: EVQLLESGGGLVQPGGSLRLSCAASGFTFSKQYMSWVRQAPGKGIEWLSTISARGGSTSYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLKFLWAPTGGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:56)
[INFO] Main: Simulation completed successfully. (00:01:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9678 | |
| 2 | V | A | -1.1219 | |
| 3 | Q | A | -1.1883 | |
| 4 | L | A | 0.0000 | |
| 5 | L | A | 0.7874 | |
| 6 | E | A | -0.1113 | |
| 7 | S | A | -0.7440 | |
| 8 | G | A | -1.2493 | |
| 9 | G | A | -0.8644 | |
| 10 | G | A | -0.1040 | |
| 11 | L | A | 0.9428 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3772 | |
| 14 | P | A | -1.4966 | |
| 15 | G | A | -1.3305 | |
| 16 | G | A | -0.9434 | |
| 17 | S | A | -1.3205 | |
| 18 | L | A | -1.0211 | |
| 19 | R | A | -2.2633 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4965 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1962 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.7426 | |
| 26 | G | A | -1.1227 | |
| 27 | F | A | -0.7311 | |
| 28 | T | A | -0.6888 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.7361 | |
| 31 | K | A | -1.9739 | |
| 32 | Q | A | -1.0445 | |
| 33 | Y | A | 0.2354 | |
| 34 | M | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.0013 | |
| 40 | A | A | -1.3819 | |
| 41 | P | A | -1.1023 | |
| 42 | G | A | -1.5309 | |
| 43 | K | A | -2.3003 | |
| 44 | G | A | -1.2286 | |
| 45 | I | A | -0.1901 | |
| 46 | E | A | -0.3969 | |
| 47 | W | A | 0.4047 | |
| 48 | L | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | T | A | 0.1938 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | -0.7343 | |
| 53 | A | A | -1.4086 | |
| 54 | R | A | -2.4600 | |
| 55 | G | A | -1.4027 | |
| 56 | G | A | -1.2670 | |
| 57 | S | A | -0.7448 | |
| 58 | T | A | -0.2087 | |
| 59 | S | A | -0.5633 | |
| 60 | Y | A | -0.9135 | |
| 61 | A | A | -1.3012 | |
| 62 | D | A | -2.4913 | |
| 63 | S | A | -1.6812 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.6365 | |
| 66 | G | A | -1.7665 | |
| 67 | R | A | -1.5919 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9715 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5066 | |
| 72 | R | A | -1.1820 | |
| 73 | D | A | -1.6515 | |
| 74 | N | A | -2.0905 | |
| 75 | S | A | -1.5399 | |
| 76 | K | A | -2.3193 | |
| 77 | N | A | -1.6746 | |
| 78 | T | A | -0.9785 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6508 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.5513 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.4666 | |
| 85 | S | A | -1.1940 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.0721 | |
| 88 | A | A | -1.6143 | |
| 89 | E | A | -2.1605 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8319 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.3144 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.0850 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | K | A | -0.8822 | |
| 99 | D | A | -1.0500 | |
| 100 | L | A | 0.2833 | |
| 101 | K | A | -1.1133 | |
| 102 | F | A | 0.0000 | |
| 103 | L | A | 0.5627 | |
| 104 | W | A | 0.9973 | |
| 105 | A | A | 0.3160 | |
| 106 | P | A | -0.3206 | |
| 107 | T | A | -0.6996 | |
| 108 | G | A | -0.6494 | |
| 109 | G | A | -0.5371 | |
| 110 | Q | A | -1.1468 | |
| 111 | G | A | -0.6851 | |
| 112 | T | A | -0.7897 | |
| 113 | Q | A | -1.1578 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | -0.3012 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -0.6533 | |
| 118 | S | A | -0.4997 |