| Chain sequence(s) |
A: KKNMLLVNPIVGIGGLFVGAPMLTANLGISSYAAKKVIDDINTGSAVATIIALVTAVVGGGLITAGIVATTKSLIKKYGAKYSAAW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.7653 | |
| 2 | K | A | -2.7930 | |
| 3 | N | A | -1.2477 | |
| 4 | M | A | 1.2129 | |
| 5 | L | A | 2.3267 | |
| 6 | L | A | 2.7392 | |
| 7 | V | A | 2.3926 | |
| 8 | N | A | 0.7860 | |
| 9 | P | A | 1.0434 | |
| 10 | I | A | 2.2812 | |
| 11 | V | A | 2.8312 | |
| 12 | G | A | 1.8223 | |
| 13 | I | A | 3.2582 | |
| 14 | G | A | 2.5513 | |
| 15 | G | A | 1.9300 | |
| 16 | L | A | 2.6761 | |
| 17 | F | A | 2.4304 | |
| 18 | V | A | 2.3720 | |
| 19 | G | A | 0.8106 | |
| 20 | A | A | 0.6540 | |
| 21 | P | A | -0.0692 | |
| 22 | M | A | 0.4858 | |
| 23 | L | A | 0.0000 | |
| 24 | T | A | -0.5215 | |
| 25 | A | A | -0.5805 | |
| 26 | N | A | -1.1387 | |
| 27 | L | A | 0.0000 | |
| 28 | G | A | -0.7281 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -0.2781 | |
| 31 | S | A | -0.2647 | |
| 32 | Y | A | 0.4154 | |
| 33 | A | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | K | A | -2.2635 | |
| 36 | K | A | -1.9946 | |
| 37 | V | A | 0.0000 | |
| 38 | I | A | 0.0000 | |
| 39 | D | A | -2.9939 | |
| 40 | D | A | -1.7216 | |
| 41 | I | A | 0.0000 | |
| 42 | N | A | -2.2930 | |
| 43 | T | A | -1.3691 | |
| 44 | G | A | -1.0496 | |
| 45 | S | A | -0.2630 | |
| 46 | A | A | 0.3577 | |
| 47 | V | A | 0.8341 | |
| 48 | A | A | 0.6802 | |
| 49 | T | A | 0.4892 | |
| 50 | I | A | 0.0000 | |
| 51 | I | A | 0.8720 | |
| 52 | A | A | 0.6639 | |
| 53 | L | A | 0.9079 | |
| 54 | V | A | 0.0000 | |
| 55 | T | A | 0.3359 | |
| 56 | A | A | 0.4990 | |
| 57 | V | A | 0.7073 | |
| 58 | V | A | 0.3466 | |
| 59 | G | A | -0.1104 | |
| 60 | G | A | -0.4631 | |
| 61 | G | A | -0.3817 | |
| 62 | L | A | 0.1266 | |
| 63 | I | A | 0.0000 | |
| 64 | T | A | 0.0828 | |
| 65 | A | A | 0.1832 | |
| 66 | G | A | -0.2703 | |
| 67 | I | A | 0.2205 | |
| 68 | V | A | 0.0000 | |
| 69 | A | A | 0.0226 | |
| 70 | T | A | -0.2492 | |
| 71 | T | A | 0.0000 | |
| 72 | K | A | -1.1048 | |
| 73 | S | A | -0.9398 | |
| 74 | L | A | -0.5832 | |
| 75 | I | A | -1.1643 | |
| 76 | K | A | -2.2228 | |
| 77 | K | A | -1.7843 | |
| 78 | Y | A | -0.1050 | |
| 79 | G | A | -0.8670 | |
| 80 | A | A | -1.2748 | |
| 81 | K | A | -1.0340 | |
| 82 | Y | A | 0.3727 | |
| 83 | S | A | 0.0000 | |
| 84 | A | A | -0.4920 | |
| 85 | A | A | 0.7889 | |
| 86 | W | A | 0.5322 |