| Chain sequence(s) |
A: CLPDEFQCRSTGICIPLAWRCDGVNDCQDDSDETNCRATGRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 1.1080 | |
| 2 | L | A | 1.1071 | |
| 3 | P | A | -0.1160 | |
| 4 | D | A | -1.1649 | |
| 5 | E | A | 0.0510 | |
| 6 | F | A | 0.0329 | |
| 7 | Q | A | -0.6728 | |
| 8 | C | A | 0.0000 | |
| 9 | R | A | -2.3685 | |
| 10 | S | A | -1.5934 | |
| 11 | T | A | -0.7503 | |
| 12 | G | A | -0.3712 | |
| 13 | I | A | 0.9621 | |
| 14 | C | A | 0.8478 | |
| 15 | I | A | 0.0000 | |
| 16 | P | A | 0.1585 | |
| 17 | L | A | 0.3126 | |
| 18 | A | A | 0.0993 | |
| 19 | W | A | 0.1992 | |
| 20 | R | A | -0.5742 | |
| 21 | C | A | -0.9829 | |
| 22 | D | A | -1.4180 | |
| 23 | G | A | -0.9625 | |
| 24 | V | A | -0.1999 | |
| 25 | N | A | -1.8666 | |
| 26 | D | A | -1.3367 | |
| 27 | C | A | 0.0000 | |
| 28 | Q | A | -2.1897 | |
| 29 | D | A | -2.4055 | |
| 30 | D | A | -2.2296 | |
| 31 | S | A | 0.0000 | |
| 32 | D | A | 0.0000 | |
| 33 | E | A | -1.3059 | |
| 34 | T | A | -1.3494 | |
| 35 | N | A | -1.7005 | |
| 36 | C | A | -1.4459 | |
| 37 | R | A | -2.0510 | |
| 38 | A | A | -1.4124 | |
| 39 | T | A | -1.1909 | |
| 40 | G | A | -1.6064 | |
| 41 | R | A | -2.0908 | |
| 42 | T | A | -1.0992 |