| Chain sequence(s) |
A: CKSGGAWCGFDPHGCCGNCGCLVGFCYGTGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.6692 | |
| 2 | K | A | 0.0947 | |
| 3 | S | A | -0.0787 | |
| 4 | G | A | 0.2063 | |
| 5 | G | A | 0.3780 | |
| 6 | A | A | 0.7415 | |
| 7 | W | A | 1.5826 | |
| 8 | C | A | 0.7387 | |
| 9 | G | A | 0.9509 | |
| 10 | F | A | 0.9414 | |
| 11 | D | A | -1.1893 | |
| 12 | P | A | -0.1866 | |
| 13 | H | A | -1.3924 | |
| 14 | G | A | -1.0189 | |
| 15 | C | A | -0.3194 | |
| 16 | C | A | 0.3788 | |
| 17 | G | A | -0.3541 | |
| 18 | N | A | -1.2576 | |
| 19 | C | A | 0.0000 | |
| 20 | G | A | 0.3278 | |
| 21 | C | A | 1.8251 | |
| 22 | L | A | 2.7429 | |
| 23 | V | A | 3.1624 | |
| 24 | G | A | 0.0000 | |
| 25 | F | A | 2.4747 | |
| 26 | C | A | 0.0000 | |
| 27 | Y | A | 1.6397 | |
| 28 | G | A | 0.0314 | |
| 29 | T | A | -0.4498 | |
| 30 | G | A | -0.5179 | |
| 31 | C | A | 0.1417 |