| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTEPQHESEDVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGHPLPAAPPPSPLYVPPPPGSPHAIPEPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9504 | |
| 2 | L | A | 1.9766 | |
| 3 | P | A | 0.6617 | |
| 4 | P | A | 0.3365 | |
| 5 | T | A | 0.0960 | |
| 6 | T | A | 0.1253 | |
| 7 | P | A | 0.1484 | |
| 8 | V | A | 1.2137 | |
| 9 | A | A | 0.0198 | |
| 10 | K | A | -1.1759 | |
| 11 | V | A | -0.4376 | |
| 12 | Q | A | -1.5634 | |
| 13 | S | A | -1.6292 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4619 | |
| 16 | E | A | -2.4608 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4493 | |
| 20 | P | A | 0.1012 | |
| 21 | T | A | 0.1150 | |
| 22 | S | A | -0.1694 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1050 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1704 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7887 | |
| 31 | R | A | -2.6320 | |
| 32 | L | A | -0.7613 | |
| 33 | L | A | 1.2172 | |
| 34 | T | A | 1.4450 | |
| 35 | V | A | 1.9672 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2266 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6106 | |
| 40 | K | A | -1.6331 | |
| 41 | D | A | -0.9262 | |
| 42 | I | A | 0.8268 | |
| 43 | V | A | 1.0217 | |
| 44 | K | A | -1.1860 | |
| 45 | N | A | -1.9261 | |
| 46 | G | A | -1.2275 | |
| 47 | K | A | -0.9416 | |
| 48 | V | A | 1.4999 | |
| 49 | V | A | 2.0589 | |
| 50 | V | A | 1.2932 | |
| 51 | P | A | 0.4846 | |
| 52 | K | A | -0.6208 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1505 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4900 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2708 | |
| 70 | K | A | -1.8173 | |
| 71 | F | A | -0.6772 | |
| 72 | A | A | -0.5897 | |
| 73 | L | A | -0.8769 | |
| 74 | P | A | -1.2670 | |
| 75 | Q | A | -2.4780 | |
| 76 | K | A | -3.0934 | |
| 77 | D | A | -2.9873 | |
| 78 | F | A | -1.6416 | |
| 79 | Y | A | -1.9271 | |
| 80 | D | A | -2.7613 | |
| 81 | P | A | -2.3480 | |
| 82 | E | A | -3.0691 | |
| 83 | K | A | -3.4457 | |
| 84 | E | A | -2.5127 | |
| 85 | R | A | -1.3185 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6532 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9525 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3043 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6633 | |
| 99 | G | A | -0.5141 | |
| 100 | P | A | -0.4164 | |
| 101 | L | A | 0.0154 | |
| 102 | G | A | -0.4258 | |
| 103 | K | A | -1.1168 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5519 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | -0.1048 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1794 | |
| 110 | L | A | -0.0755 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1386 | |
| 113 | K | A | -0.5752 | |
| 114 | L | A | -1.0692 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5739 | |
| 117 | T | A | -1.3794 | |
| 118 | E | A | -2.6058 | |
| 119 | N | A | -2.6004 | |
| 120 | P | A | -2.1939 | |
| 121 | T | A | -1.8229 | |
| 122 | E | A | -2.5244 | |
| 123 | P | A | -1.8194 | |
| 124 | Q | A | -2.1561 | |
| 125 | H | A | -2.7264 | |
| 126 | E | A | -3.3664 | |
| 127 | S | A | -2.6790 | |
| 128 | E | A | -3.2727 | |
| 129 | D | A | -2.9805 | |
| 130 | V | A | -1.8904 | |
| 131 | R | A | -1.2692 | |
| 132 | V | A | -0.3237 | |
| 133 | N | A | -0.9162 | |
| 134 | F | A | -0.3886 | |
| 135 | S | A | -0.3684 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8074 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2656 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5615 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2298 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1031 | |
| 157 | D | A | 0.2790 | |
| 158 | L | A | 0.7653 | |
| 159 | A | A | 0.1520 | |
| 160 | E | A | -1.4506 | |
| 161 | P | A | -0.2027 | |
| 162 | C | A | 0.1926 | |
| 163 | P | A | -0.1622 | |
| 164 | G | A | -0.0702 | |
| 165 | L | A | 0.5966 | |
| 166 | P | A | -0.1128 | |
| 167 | P | A | -0.3401 | |
| 168 | G | A | -0.4173 | |
| 169 | A | A | -0.0146 | |
| 170 | C | A | 0.6749 | |
| 171 | P | A | 0.5206 | |
| 172 | P | A | 0.7679 | |
| 173 | I | A | 1.9554 | |
| 174 | Q | A | 0.8010 | |
| 175 | L | A | 1.4476 | |
| 176 | V | A | 0.8221 | |
| 177 | N | A | -0.3132 | |
| 178 | S | A | 0.0414 | |
| 179 | V | A | 0.4569 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3902 | |
| 182 | D | A | 0.0876 | |
| 183 | G | A | -0.1600 | |
| 184 | D | A | -0.5634 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1264 | |
| 190 | F | A | 0.0533 | |
| 191 | G | A | -0.1116 | |
| 192 | N | A | -0.2940 | |
| 193 | M | A | -0.1671 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4382 | |
| 197 | E | A | -2.6390 | |
| 198 | L | A | -1.2465 | |
| 199 | Q | A | -2.5492 | |
| 200 | Q | A | -3.3469 | |
| 201 | D | A | -3.6073 | |
| 202 | R | A | -3.3479 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2098 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3876 | |
| 211 | S | A | -1.9056 | |
| 212 | T | A | -1.4799 | |
| 213 | R | A | -2.1861 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1812 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3463 | |
| 220 | L | A | 0.5468 | |
| 221 | K | A | -1.2169 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8568 | |
| 224 | N | A | -1.5427 | |
| 225 | E | A | -1.2954 | |
| 226 | A | A | -0.6793 | |
| 227 | Y | A | -0.4120 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6908 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0966 | |
| 234 | F | A | 0.2882 | |
| 235 | G | A | -0.8103 | |
| 236 | R | A | -2.6123 | |
| 237 | R | A | -2.9111 | |
| 238 | E | A | -2.1439 | |
| 239 | Q | A | -0.1516 | |
| 240 | V | A | 1.5030 | |
| 241 | Y | A | 1.2131 | |
| 242 | A | A | 0.1255 | |
| 243 | R | A | -1.4091 | |
| 244 | H | A | -1.1929 | |
| 245 | F | A | -0.1627 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7054 | |
| 249 | A | A | -1.5806 | |
| 250 | G | A | -1.2905 | |
| 251 | P | A | -1.2237 | |
| 252 | E | A | -1.6234 | |
| 253 | G | A | -1.2263 | |
| 254 | H | A | -1.4210 | |
| 255 | P | A | -1.2556 | |
| 256 | L | A | 0.0396 | |
| 257 | P | A | 0.0019 | |
| 258 | A | A | 0.0273 | |
| 259 | A | A | 0.3121 | |
| 260 | P | A | -0.2259 | |
| 261 | P | A | 0.0155 | |
| 262 | P | A | 0.0596 | |
| 263 | S | A | 0.5673 | |
| 264 | P | A | 0.6785 | |
| 265 | L | A | 1.8735 | |
| 266 | Y | A | 1.7782 | |
| 267 | V | A | 1.9235 | |
| 268 | P | A | 0.7485 | |
| 269 | P | A | -0.0925 | |
| 270 | P | A | -0.5133 | |
| 271 | P | A | -0.7738 | |
| 272 | G | A | -0.8905 | |
| 273 | S | A | -0.8484 | |
| 274 | P | A | -0.8517 | |
| 275 | H | A | -1.1451 | |
| 276 | A | A | -0.6980 | |
| 277 | I | A | -0.1771 | |
| 278 | P | A | -1.1700 | |
| 279 | E | A | -2.4146 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.8953 | |
| 282 | D | A | -1.0654 | |
| 283 | Y | A | 0.9550 | |
| 284 | F | A | 0.7372 | |
| 285 | G | A | 0.1217 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7513 | |
| 291 | L | A | 1.5476 | |
| 292 | V | A | 0.5394 | |
| 293 | S | A | -0.1578 | |
| 294 | S | A | -0.9564 | |
| 295 | D | A | -1.8460 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1250 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6282 | |
| 301 | R | A | -1.8463 | |
| 302 | P | A | -0.9443 | |
| 303 | F | A | -0.1539 | |
| 304 | W | A | -0.5202 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0849 | |
| 307 | R | A | -2.8347 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2394 | |
| 310 | G | A | -1.2175 | |
| 311 | N | A | -1.3191 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9485 | |
| 319 | N | A | -0.9073 | |
| 320 | E | A | -1.0625 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4251 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2888 | |
| 333 | N | A | 0.3467 | |
| 334 | F | A | 1.4615 | |
| 335 | T | A | 0.7341 | |
| 336 | I | A | 0.3857 | |
| 337 | S | A | -0.9865 | |
| 338 | Q | A | -1.7312 | |
| 339 | Q | A | -1.1184 | |
| 340 | L | A | 0.7414 | |
| 341 | C | A | 0.6665 | |
| 342 | T | A | 0.5000 | |
| 343 | P | A | 0.3164 | |
| 344 | L | A | 1.3422 | |
| 345 | P | A | 0.7079 | |
| 346 | N | A | 0.0557 | |
| 347 | V | A | 1.7447 | |
| 348 | Y | A | 1.6276 | |
| 349 | D | A | 0.2288 | |
| 350 | P | A | -0.4055 | |
| 351 | S | A | -0.3469 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6899 | |
| 354 | K | A | -1.8345 | |
| 355 | N | A | -1.7807 | |
| 356 | Y | A | -0.1116 | |
| 357 | L | A | 0.5731 | |
| 358 | R | A | 0.9109 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4480 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0184 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9101 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6747 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2844 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3337 | |
| 376 | L | A | -1.7663 | |
| 377 | D | A | -2.0500 | |
| 378 | P | A | -1.0687 | |
| 379 | G | A | -1.0256 | |
| 380 | V | A | -0.9364 | |
| 381 | L | A | -0.5422 | |
| 382 | A | A | -0.6592 | |
| 383 | H | A | -0.8521 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3978 | |
| 386 | T | A | -0.5770 | |
| 387 | M | A | -0.3348 | |
| 388 | N | A | -0.8695 | |
| 389 | P | A | -1.2823 | |
| 390 | T | A | -1.5733 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5471 | |
| 393 | E | A | -3.1359 | |
| 394 | N | A | -2.7366 | |
| 395 | W | A | -1.5382 | |
| 396 | N | A | -1.1708 | |
| 397 | L | A | -0.2289 | |
| 398 | G | A | 0.5361 | |
| 399 | F | A | 2.4306 | |
| 400 | V | A | 2.0471 | |
| 401 | P | A | 0.0602 | |
| 402 | P | A | -1.8983 | |
| 403 | K | A | -3.4734 | |
| 404 | E | A | -3.9489 | |
| 405 | R | A | -4.3264 | |
| 406 | E | A | -3.9291 | |
| 407 | D | A | -2.8968 | |
| 408 | P | A | -1.7769 | |
| 409 | Y | A | -0.9721 | |
| 410 | K | A | -2.0881 | |
| 411 | G | A | -0.6326 | |
| 412 | L | A | 0.6726 | |
| 413 | I | A | 1.5840 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3957 | |
| 416 | E | A | -1.6679 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8503 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8941 | |
| 421 | E | A | -2.4954 | |
| 422 | R | A | -2.0619 | |
| 423 | F | A | -1.0187 | |
| 424 | S | A | -1.3239 | |
| 425 | Q | A | -1.8623 | |
| 426 | D | A | -2.9003 | |
| 427 | L | A | -1.9953 | |
| 428 | D | A | -2.7851 | |
| 429 | Q | A | -2.6159 | |
| 430 | F | A | -1.4399 | |
| 431 | A | A | -0.8918 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5635 | |
| 435 | K | A | -0.7063 | |
| 436 | F | A | 0.1594 | |
| 437 | L | A | 1.0389 | |
| 438 | Y | A | 0.8336 | |
| 439 | Q | A | -0.2643 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine