Project name: 8256f2aebf7a994

Status: done

Started: 2026-07-08 16:40:13
Settings
Chain sequence(s) A: AEFAAYKAALAAVKEAAKKYMAAVKKDLGDSPEVKELLALQKKLDATTAKMVAALEAKKWDEAVALAKEVQELVKKQVALADKIVGSLSDEAKAAYAALKAARAATEAALAALLKAIAAQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:00)
Show buried residues

Minimal score value
-3.8809
Maximal score value
0.0
Average score
-1.3812
Total score value
-165.7381

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.3654
2 E A -1.0135
3 F A -0.4897
4 A A -0.3337
5 A A -0.3686
6 Y A 0.0000
7 K A -0.7689
8 A A -0.3115
9 A A -0.5376
10 L A -0.9471
11 A A -0.9633
12 A A -1.1966
13 V A 0.0000
14 K A -2.9363
15 E A -3.4201
16 A A -2.6156
17 A A 0.0000
18 K A -3.5058
19 K A -3.2047
20 Y A 0.0000
21 M A 0.0000
22 A A -1.8643
23 A A 0.0000
24 V A 0.0000
25 K A -2.7561
26 K A -2.9409
27 D A -2.3643
28 L A -1.5948
29 G A -2.3262
30 D A -3.0309
31 S A -2.0424
32 P A -1.9342
33 E A -2.2782
34 V A 0.0000
35 K A -3.1151
36 E A -2.9895
37 L A 0.0000
38 L A -1.8477
39 A A -1.9401
40 L A -1.8007
41 Q A -2.1100
42 K A -2.8933
43 K A -2.7604
44 L A 0.0000
45 D A -2.4390
46 A A -1.8091
47 T A 0.0000
48 T A 0.0000
49 A A -1.0451
50 K A -2.0549
51 M A 0.0000
52 V A -1.0609
53 A A -1.6223
54 A A 0.0000
55 L A 0.0000
56 E A -2.5101
57 A A -2.1084
58 K A -3.1244
59 K A -3.0700
60 W A -2.1541
61 D A -2.7027
62 E A -3.0106
63 A A 0.0000
64 V A -1.0040
65 A A -1.4389
66 L A -1.9345
67 A A 0.0000
68 K A -2.9035
69 E A -3.3590
70 V A 0.0000
71 Q A -3.4622
72 E A -3.8809
73 L A 0.0000
74 V A -1.9550
75 K A -2.7294
76 K A -1.9179
77 Q A 0.0000
78 V A -0.9743
79 A A -1.2831
80 L A -1.4932
81 A A 0.0000
82 D A -2.2709
83 K A -2.4478
84 I A 0.0000
85 V A -1.3838
86 G A -1.3390
87 S A -0.9643
88 L A 0.0000
89 S A -2.2813
90 D A -3.1332
91 E A -3.3283
92 A A 0.0000
93 K A -2.3130
94 A A -1.7435
95 A A -1.8478
96 Y A 0.0000
97 A A -0.9397
98 A A -0.7801
99 L A 0.0000
100 K A -1.5188
101 A A -0.7295
102 A A -1.1421
103 R A -1.3142
104 A A -1.0422
105 A A -0.7070
106 T A 0.0000
107 E A -1.8881
108 A A -0.7803
109 A A -0.9102
110 L A 0.0000
111 A A -0.9234
112 A A -0.9022
113 L A 0.0000
114 L A -0.5578
115 K A -1.7993
116 A A -1.1083
117 I A 0.0000
118 A A -0.8714
119 A A -0.8864
120 Q A -1.2692
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018