| Chain sequence(s) |
A: AEFAAYKAALAAVKEAAKKYMAAVKKDLGDSPEVKELLALQKKLDATTAKMVAALEAKKWDEAVALAKEVQELVKKQVALADKIVGSLSDEAKAAYAALKAARAATEAALAALLKAIAAQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:59)
[INFO] Main: Simulation completed successfully. (00:03:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.3654 | |
| 2 | E | A | -1.0135 | |
| 3 | F | A | -0.4897 | |
| 4 | A | A | -0.3337 | |
| 5 | A | A | -0.3686 | |
| 6 | Y | A | 0.0000 | |
| 7 | K | A | -0.7689 | |
| 8 | A | A | -0.3115 | |
| 9 | A | A | -0.5376 | |
| 10 | L | A | -0.9471 | |
| 11 | A | A | -0.9633 | |
| 12 | A | A | -1.1966 | |
| 13 | V | A | 0.0000 | |
| 14 | K | A | -2.9363 | |
| 15 | E | A | -3.4201 | |
| 16 | A | A | -2.6156 | |
| 17 | A | A | 0.0000 | |
| 18 | K | A | -3.5058 | |
| 19 | K | A | -3.2047 | |
| 20 | Y | A | 0.0000 | |
| 21 | M | A | 0.0000 | |
| 22 | A | A | -1.8643 | |
| 23 | A | A | 0.0000 | |
| 24 | V | A | 0.0000 | |
| 25 | K | A | -2.7561 | |
| 26 | K | A | -2.9409 | |
| 27 | D | A | -2.3643 | |
| 28 | L | A | -1.5948 | |
| 29 | G | A | -2.3262 | |
| 30 | D | A | -3.0309 | |
| 31 | S | A | -2.0424 | |
| 32 | P | A | -1.9342 | |
| 33 | E | A | -2.2782 | |
| 34 | V | A | 0.0000 | |
| 35 | K | A | -3.1151 | |
| 36 | E | A | -2.9895 | |
| 37 | L | A | 0.0000 | |
| 38 | L | A | -1.8477 | |
| 39 | A | A | -1.9401 | |
| 40 | L | A | -1.8007 | |
| 41 | Q | A | -2.1100 | |
| 42 | K | A | -2.8933 | |
| 43 | K | A | -2.7604 | |
| 44 | L | A | 0.0000 | |
| 45 | D | A | -2.4390 | |
| 46 | A | A | -1.8091 | |
| 47 | T | A | 0.0000 | |
| 48 | T | A | 0.0000 | |
| 49 | A | A | -1.0451 | |
| 50 | K | A | -2.0549 | |
| 51 | M | A | 0.0000 | |
| 52 | V | A | -1.0609 | |
| 53 | A | A | -1.6223 | |
| 54 | A | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | E | A | -2.5101 | |
| 57 | A | A | -2.1084 | |
| 58 | K | A | -3.1244 | |
| 59 | K | A | -3.0700 | |
| 60 | W | A | -2.1541 | |
| 61 | D | A | -2.7027 | |
| 62 | E | A | -3.0106 | |
| 63 | A | A | 0.0000 | |
| 64 | V | A | -1.0040 | |
| 65 | A | A | -1.4389 | |
| 66 | L | A | -1.9345 | |
| 67 | A | A | 0.0000 | |
| 68 | K | A | -2.9035 | |
| 69 | E | A | -3.3590 | |
| 70 | V | A | 0.0000 | |
| 71 | Q | A | -3.4622 | |
| 72 | E | A | -3.8809 | |
| 73 | L | A | 0.0000 | |
| 74 | V | A | -1.9550 | |
| 75 | K | A | -2.7294 | |
| 76 | K | A | -1.9179 | |
| 77 | Q | A | 0.0000 | |
| 78 | V | A | -0.9743 | |
| 79 | A | A | -1.2831 | |
| 80 | L | A | -1.4932 | |
| 81 | A | A | 0.0000 | |
| 82 | D | A | -2.2709 | |
| 83 | K | A | -2.4478 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | -1.3838 | |
| 86 | G | A | -1.3390 | |
| 87 | S | A | -0.9643 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -2.2813 | |
| 90 | D | A | -3.1332 | |
| 91 | E | A | -3.3283 | |
| 92 | A | A | 0.0000 | |
| 93 | K | A | -2.3130 | |
| 94 | A | A | -1.7435 | |
| 95 | A | A | -1.8478 | |
| 96 | Y | A | 0.0000 | |
| 97 | A | A | -0.9397 | |
| 98 | A | A | -0.7801 | |
| 99 | L | A | 0.0000 | |
| 100 | K | A | -1.5188 | |
| 101 | A | A | -0.7295 | |
| 102 | A | A | -1.1421 | |
| 103 | R | A | -1.3142 | |
| 104 | A | A | -1.0422 | |
| 105 | A | A | -0.7070 | |
| 106 | T | A | 0.0000 | |
| 107 | E | A | -1.8881 | |
| 108 | A | A | -0.7803 | |
| 109 | A | A | -0.9102 | |
| 110 | L | A | 0.0000 | |
| 111 | A | A | -0.9234 | |
| 112 | A | A | -0.9022 | |
| 113 | L | A | 0.0000 | |
| 114 | L | A | -0.5578 | |
| 115 | K | A | -1.7993 | |
| 116 | A | A | -1.1083 | |
| 117 | I | A | 0.0000 | |
| 118 | A | A | -0.8714 | |
| 119 | A | A | -0.8864 | |
| 120 | Q | A | -1.2692 |