Project name: Cro protein

Status: done

Started: 2025-07-27 15:35:52
Settings
Chain sequence(s) A: MQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCDPVWLQYGT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-2.84
Maximal score value
1.6814
Average score
-0.5185
Total score value
-33.7042

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
-1 M A -0.2963
0 Q A -0.7675
1 T A -0.6909
2 L A 0.0000
3 S A -0.7619
4 E A -1.1595
5 R A 0.0000
6 L A 0.0000
7 K A -1.0034
8 K A -1.2853
9 R A -0.9405
10 R A 0.0000
11 I A 0.4217
12 A A -0.0992
13 L A -0.3622
14 K A -1.1186
15 M A -0.5074
16 T A -0.5158
17 Q A -1.0360
18 T A -1.4501
19 E A -1.6579
20 L A 0.0000
21 A A 0.0000
22 T A -1.7296
23 K A -2.0763
24 A A -1.1515
25 G A -1.4667
26 V A -1.6239
27 K A -2.5609
28 Q A -2.3832
29 Q A -2.2170
30 S A -1.4039
31 I A 0.0000
32 Q A -1.0885
33 L A 0.1618
34 I A 0.0000
35 E A 0.0000
36 A A 0.1773
37 G A 0.1009
38 V A 1.1221
39 T A -0.7502
40 K A -2.3125
41 R A -2.8400
42 P A 0.0000
43 R A -1.8687
44 F A 0.0451
45 L A 0.0000
46 F A 1.6748
47 E A 0.0624
48 I A 0.0000
49 A A 0.0000
50 M A -0.1420
51 A A -0.6244
52 L A 0.0000
53 N A -1.4618
54 C A -0.7975
55 D A -1.0106
56 P A 0.5472
57 V A 1.6814
58 W A 0.6890
59 L A 0.0000
60 Q A 0.4673
61 Y A 1.4619
62 G A 0.4342
63 T A 0.4104
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Laboratory of Theory of Biopolymers 2018