Chain sequence(s) |
A: MQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCDPVWLQYGT
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07) [INFO] Main: Simulation completed successfully. (00:01:08) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
-1 | M | A | -0.2963 | |
0 | Q | A | -0.7675 | |
1 | T | A | -0.6909 | |
2 | L | A | 0.0000 | |
3 | S | A | -0.7619 | |
4 | E | A | -1.1595 | |
5 | R | A | 0.0000 | |
6 | L | A | 0.0000 | |
7 | K | A | -1.0034 | |
8 | K | A | -1.2853 | |
9 | R | A | -0.9405 | |
10 | R | A | 0.0000 | |
11 | I | A | 0.4217 | |
12 | A | A | -0.0992 | |
13 | L | A | -0.3622 | |
14 | K | A | -1.1186 | |
15 | M | A | -0.5074 | |
16 | T | A | -0.5158 | |
17 | Q | A | -1.0360 | |
18 | T | A | -1.4501 | |
19 | E | A | -1.6579 | |
20 | L | A | 0.0000 | |
21 | A | A | 0.0000 | |
22 | T | A | -1.7296 | |
23 | K | A | -2.0763 | |
24 | A | A | -1.1515 | |
25 | G | A | -1.4667 | |
26 | V | A | -1.6239 | |
27 | K | A | -2.5609 | |
28 | Q | A | -2.3832 | |
29 | Q | A | -2.2170 | |
30 | S | A | -1.4039 | |
31 | I | A | 0.0000 | |
32 | Q | A | -1.0885 | |
33 | L | A | 0.1618 | |
34 | I | A | 0.0000 | |
35 | E | A | 0.0000 | |
36 | A | A | 0.1773 | |
37 | G | A | 0.1009 | |
38 | V | A | 1.1221 | |
39 | T | A | -0.7502 | |
40 | K | A | -2.3125 | |
41 | R | A | -2.8400 | |
42 | P | A | 0.0000 | |
43 | R | A | -1.8687 | |
44 | F | A | 0.0451 | |
45 | L | A | 0.0000 | |
46 | F | A | 1.6748 | |
47 | E | A | 0.0624 | |
48 | I | A | 0.0000 | |
49 | A | A | 0.0000 | |
50 | M | A | -0.1420 | |
51 | A | A | -0.6244 | |
52 | L | A | 0.0000 | |
53 | N | A | -1.4618 | |
54 | C | A | -0.7975 | |
55 | D | A | -1.0106 | |
56 | P | A | 0.5472 | |
57 | V | A | 1.6814 | |
58 | W | A | 0.6890 | |
59 | L | A | 0.0000 | |
60 | Q | A | 0.4673 | |
61 | Y | A | 1.4619 | |
62 | G | A | 0.4342 | |
63 | T | A | 0.4104 |