| Chain sequence(s) |
A: MEDEMAEIALEMAE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.3955 | |
| 2 | E | A | -2.8808 | |
| 3 | D | A | -3.5283 | |
| 4 | E | A | -3.1000 | |
| 5 | M | A | -1.4943 | |
| 6 | A | A | -1.6220 | |
| 7 | E | A | -2.2971 | |
| 8 | I | A | -0.2505 | |
| 9 | A | A | -0.0574 | |
| 10 | L | A | 0.1279 | |
| 11 | E | A | -1.1849 | |
| 12 | M | A | 0.1572 | |
| 13 | A | A | -0.2035 | |
| 14 | E | A | -1.6384 |