| Chain sequence(s) |
A: MSSGNILWGSQNPIVFKNSFGVSNADTGSQDDLSQQNPFAEGYGVLLILLMVIQAIANNKFIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQITIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8309 | |
| 2 | S | A | -0.1014 | |
| 3 | S | A | -0.6445 | |
| 4 | G | A | -0.6646 | |
| 5 | N | A | -0.6942 | |
| 6 | I | A | 0.8002 | |
| 7 | L | A | 1.4338 | |
| 8 | W | A | 0.6517 | |
| 9 | G | A | -0.2672 | |
| 10 | S | A | -1.1106 | |
| 11 | Q | A | -1.9744 | |
| 12 | N | A | -1.5804 | |
| 13 | P | A | -0.0085 | |
| 14 | I | A | 1.4878 | |
| 15 | V | A | 2.1279 | |
| 16 | F | A | 1.3676 | |
| 17 | K | A | -1.2296 | |
| 18 | N | A | -1.6714 | |
| 19 | S | A | -0.8651 | |
| 20 | F | A | 0.0786 | |
| 21 | G | A | 0.2691 | |
| 22 | V | A | 1.3705 | |
| 23 | S | A | -0.3956 | |
| 24 | N | A | -1.5458 | |
| 25 | A | A | -1.4810 | |
| 26 | D | A | -2.4399 | |
| 27 | T | A | -1.6898 | |
| 28 | G | A | -1.7276 | |
| 29 | S | A | -1.9555 | |
| 30 | Q | A | -3.0860 | |
| 31 | D | A | -3.4520 | |
| 32 | D | A | -3.0729 | |
| 33 | L | A | -0.7987 | |
| 34 | S | A | -1.4946 | |
| 35 | Q | A | -2.8252 | |
| 36 | Q | A | -2.3705 | |
| 37 | N | A | 0.0000 | |
| 38 | P | A | -1.0580 | |
| 39 | F | A | -0.2042 | |
| 40 | A | A | -0.8905 | |
| 41 | E | A | -1.6912 | |
| 42 | G | A | -0.1131 | |
| 43 | Y | A | 0.4904 | |
| 44 | G | A | 0.7901 | |
| 45 | V | A | 2.3550 | |
| 46 | L | A | 1.8944 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 3.6798 | |
| 49 | L | A | 2.7493 | |
| 50 | L | A | 0.0000 | |
| 51 | M | A | 2.9625 | |
| 52 | V | A | 2.7035 | |
| 53 | I | A | 0.0000 | |
| 54 | Q | A | 1.0462 | |
| 55 | A | A | 0.8554 | |
| 56 | I | A | 1.5174 | |
| 57 | A | A | 0.0000 | |
| 58 | N | A | -0.0797 | |
| 59 | N | A | -0.5332 | |
| 60 | K | A | -0.6448 | |
| 61 | F | A | -0.0423 | |
| 62 | I | A | -0.0561 | |
| 63 | E | A | -1.7907 | |
| 64 | V | A | 0.0000 | |
| 65 | Q | A | -2.2767 | |
| 66 | K | A | -2.9509 | |
| 67 | N | A | -2.7347 | |
| 68 | A | A | -2.6674 | |
| 69 | E | A | -3.9622 | |
| 70 | R | A | -3.4110 | |
| 71 | A | A | -3.6096 | |
| 72 | R | A | -3.7445 | |
| 73 | N | A | -2.9599 | |
| 74 | T | A | 0.0000 | |
| 75 | Q | A | -3.4627 | |
| 76 | E | A | -3.4714 | |
| 77 | K | A | -2.5557 | |
| 78 | S | A | 0.0000 | |
| 79 | N | A | -3.0538 | |
| 80 | E | A | -2.6777 | |
| 81 | M | A | 0.0000 | |
| 82 | D | A | -2.8649 | |
| 83 | E | A | -3.0877 | |
| 84 | V | A | 0.0000 | |
| 85 | I | A | -2.6402 | |
| 86 | A | A | -2.1881 | |
| 87 | K | A | -3.2677 | |
| 88 | A | A | 0.0000 | |
| 89 | A | A | -2.4988 | |
| 90 | K | A | -2.7280 | |
| 91 | G | A | -2.9136 | |
| 92 | D | A | -3.1307 | |
| 93 | A | A | -2.3939 | |
| 94 | K | A | -2.9506 | |
| 95 | T | A | -2.9482 | |
| 96 | K | A | -3.4205 | |
| 97 | E | A | -3.1381 | |
| 98 | E | A | -3.4771 | |
| 99 | V | A | 0.0000 | |
| 100 | P | A | -2.3438 | |
| 101 | E | A | -2.9612 | |
| 102 | D | A | -2.6512 | |
| 103 | V | A | 0.0000 | |
| 104 | I | A | -2.3275 | |
| 105 | K | A | -3.6082 | |
| 106 | Y | A | -2.5432 | |
| 107 | M | A | 0.0000 | |
| 108 | R | A | -3.2882 | |
| 109 | D | A | -3.2448 | |
| 110 | N | A | -2.0967 | |
| 111 | G | A | -1.5077 | |
| 112 | I | A | 0.0000 | |
| 113 | L | A | -0.0879 | |
| 114 | I | A | 0.0000 | |
| 115 | D | A | -1.6065 | |
| 116 | G | A | -0.9823 | |
| 117 | M | A | -1.0963 | |
| 118 | T | A | -1.1924 | |
| 119 | I | A | 0.0000 | |
| 120 | D | A | -2.4985 | |
| 121 | D | A | -2.4836 | |
| 122 | Y | A | 0.0000 | |
| 123 | M | A | -1.5676 | |
| 124 | A | A | -1.7762 | |
| 125 | K | A | -1.9576 | |
| 126 | Y | A | -0.6517 | |
| 127 | G | A | -2.0545 | |
| 128 | D | A | -2.4601 | |
| 129 | H | A | -2.3099 | |
| 130 | G | A | -2.4153 | |
| 131 | K | A | -3.0467 | |
| 132 | L | A | 0.0000 | |
| 133 | D | A | -2.9384 | |
| 134 | K | A | -2.6516 | |
| 135 | G | A | -1.5356 | |
| 136 | G | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | Q | A | -1.5436 | |
| 139 | A | A | -0.9111 | |
| 140 | I | A | 0.0000 | |
| 141 | K | A | -1.4466 | |
| 142 | A | A | -1.0401 | |
| 143 | A | A | -0.9491 | |
| 144 | L | A | 0.0000 | |
| 145 | D | A | -2.2599 | |
| 146 | N | A | -2.4697 | |
| 147 | D | A | -2.2535 | |
| 148 | A | A | 0.0000 | |
| 149 | N | A | -3.3380 | |
| 150 | R | A | -3.3492 | |
| 151 | N | A | 0.0000 | |
| 152 | T | A | -2.4056 | |
| 153 | D | A | -2.5046 | |
| 154 | L | A | -1.2782 | |
| 155 | M | A | -1.6562 | |
| 156 | S | A | -0.7898 | |
| 157 | Q | A | -0.8235 | |
| 158 | G | A | 0.0000 | |
| 159 | Q | A | -0.8466 | |
| 160 | I | A | 0.3384 | |
| 161 | T | A | -0.4406 | |
| 162 | I | A | -0.9611 | |
| 163 | Q | A | -2.1004 | |
| 164 | K | A | -2.8052 | |
| 165 | M | A | 0.0000 | |
| 166 | S | A | -2.1584 | |
| 167 | Q | A | -3.0990 | |
| 168 | E | A | -2.7690 | |
| 169 | L | A | 0.0000 | |
| 170 | N | A | -2.1687 | |
| 171 | A | A | -1.4369 | |
| 172 | V | A | 0.0000 | |
| 173 | L | A | -0.2216 | |
| 174 | T | A | -0.5445 | |
| 175 | Q | A | -0.8352 | |
| 176 | L | A | 0.0000 | |
| 177 | T | A | 0.0413 | |
| 178 | G | A | -0.4275 | |
| 179 | L | A | -0.0507 | |
| 180 | I | A | 0.5265 | |
| 181 | S | A | -0.8724 | |
| 182 | K | A | -1.7831 | |
| 183 | W | A | -0.5499 | |
| 184 | G | A | -0.8833 | |
| 185 | E | A | -1.6842 | |
| 186 | I | A | -0.3113 | |
| 187 | S | A | 0.1781 | |
| 188 | S | A | -0.5139 | |
| 189 | M | A | 0.3382 | |
| 190 | I | A | 0.9172 | |
| 191 | A | A | -0.0936 | |
| 192 | Q | A | -0.8667 | |
| 193 | K | A | -1.2597 | |
| 194 | T | A | -0.1776 | |
| 195 | Y | A | 0.4863 | |
| 196 | S | A | -0.4861 |