Project name: query_structure

Status: done

Started: 2026-03-16 23:23:53
Settings
Chain sequence(s) A: GIPCGESCVFIPCISTVIGCSCKNKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:18)
Show buried residues

Minimal score value
-2.4765
Maximal score value
3.0989
Average score
0.5043
Total score value
15.1297

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5363
2 I A 1.0287
3 P A 0.1048
4 C A 0.5224
5 G A -0.3338
6 E A 0.1400
7 S A 0.4598
8 C A 1.1241
9 V A 2.3637
10 F A 2.9371
11 I A 2.2575
12 P A 1.4463
13 C A 1.7852
14 I A 2.7207
15 S A 2.0254
16 T A 1.9244
17 V A 3.0989
18 I A 2.8520
19 G A 0.8962
20 C A 0.0000
21 S A -0.3303
22 C A -0.7320
23 K A -2.4765
24 N A -2.2861
25 K A -1.4473
26 V A -0.9751
27 C A 0.0000
28 Y A -0.8641
29 R A -0.9990
30 N A -1.5770
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Laboratory of Theory of Biopolymers 2018