| Chain sequence(s) |
A: EVQLQASGGGSVPPGGSLRLSCTASLRAFSTYTMGWFRQAPGKEREFVAASNWRGTDFHDSVRGRFIISRDNTEKTVDLQMNSLKPEDTAIYYCAADGSTWLKRSDYSYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0989 | |
| 2 | V | A | -1.2376 | |
| 3 | Q | A | -1.8249 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7767 | |
| 6 | A | A | -1.1937 | |
| 7 | S | A | -1.3007 | |
| 8 | G | A | -1.2306 | |
| 9 | G | A | -1.1823 | |
| 10 | G | A | -0.9481 | |
| 11 | S | A | -0.5660 | |
| 12 | V | A | -0.4659 | |
| 13 | P | A | -0.7989 | |
| 14 | P | A | -1.3847 | |
| 15 | G | A | -1.2077 | |
| 16 | G | A | -0.8283 | |
| 17 | S | A | -1.0531 | |
| 18 | L | A | -1.0774 | |
| 19 | R | A | -1.9257 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -1.0623 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -1.1647 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.8281 | |
| 26 | L | A | -0.2454 | |
| 27 | R | A | -1.5937 | |
| 28 | A | A | 0.0000 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.5721 | |
| 31 | T | A | -0.2438 | |
| 32 | Y | A | 0.0242 | |
| 33 | T | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | -1.4802 | |
| 39 | Q | A | -2.1732 | |
| 40 | A | A | -2.0160 | |
| 41 | P | A | -1.3981 | |
| 42 | G | A | -1.9449 | |
| 43 | K | A | -3.3887 | |
| 44 | E | A | -3.6359 | |
| 45 | R | A | -2.9382 | |
| 46 | E | A | -2.5912 | |
| 47 | F | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | N | A | -0.0375 | |
| 53 | W | A | 0.2790 | |
| 54 | R | A | -1.1784 | |
| 55 | G | A | -0.6689 | |
| 56 | T | A | -0.2142 | |
| 57 | D | A | -0.7822 | |
| 58 | F | A | -1.0543 | |
| 59 | H | A | -1.9215 | |
| 60 | D | A | -2.6259 | |
| 61 | S | A | -1.8835 | |
| 62 | V | A | 0.0000 | |
| 63 | R | A | -2.5793 | |
| 64 | G | A | -1.5106 | |
| 65 | R | A | -0.9370 | |
| 66 | F | A | 0.0000 | |
| 67 | I | A | 0.9488 | |
| 68 | I | A | 0.0000 | |
| 69 | S | A | -0.4597 | |
| 70 | R | A | -1.5416 | |
| 71 | D | A | -2.5639 | |
| 72 | N | A | -2.4966 | |
| 73 | T | A | -1.9447 | |
| 74 | E | A | -2.6768 | |
| 75 | K | A | -2.2472 | |
| 76 | T | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | D | A | -0.9131 | |
| 79 | L | A | 0.0000 | |
| 80 | Q | A | -0.4517 | |
| 81 | M | A | 0.0000 | |
| 82 | N | A | -0.9503 | |
| 83 | S | A | -1.1294 | |
| 84 | L | A | 0.0000 | |
| 85 | K | A | -2.3651 | |
| 86 | P | A | -1.8765 | |
| 87 | E | A | -2.4085 | |
| 88 | D | A | 0.0000 | |
| 89 | T | A | -1.1840 | |
| 90 | A | A | 0.0000 | |
| 91 | I | A | -0.4860 | |
| 92 | Y | A | 0.0000 | |
| 93 | Y | A | -0.6681 | |
| 94 | C | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | D | A | 0.0000 | |
| 98 | G | A | -0.2609 | |
| 99 | S | A | -0.1346 | |
| 100 | T | A | 0.2677 | |
| 101 | W | A | 0.7115 | |
| 102 | L | A | -0.0150 | |
| 103 | K | A | -1.4474 | |
| 104 | R | A | -2.1994 | |
| 105 | S | A | -2.2244 | |
| 106 | D | A | -2.3275 | |
| 107 | Y | A | 0.0000 | |
| 108 | S | A | -0.4210 | |
| 109 | Y | A | -0.0136 | |
| 110 | W | A | 0.0021 | |
| 111 | G | A | -0.9257 | |
| 112 | Q | A | -1.5022 | |
| 113 | G | A | -1.0174 | |
| 114 | T | A | -1.0919 | |
| 115 | Q | A | -1.2830 | |
| 116 | V | A | 0.0000 | |
| 117 | T | A | -0.8869 | |
| 118 | V | A | 0.0000 | |
| 119 | S | A | -0.8372 |