| Chain sequence(s) |
D: EIVLTQSPATLSLSPGERATLSCRASQSVYSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPFTFGPGTKVDIK
G: QVQLVESGGGVVQPGRSLRLSCAASGFIFSSYAMHWVRQAPGNGLEWVAFMSYDGSNKKYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRGIAAGGNYYYYGMDVWGQGTTVTVSS input PDB |
| Selected Chain(s) | D,G |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:53)
[INFO] Main: Simulation completed successfully. (00:02:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | D | -1.4017 | |
| 2 | I | D | 0.0000 | |
| 3 | V | D | 0.9475 | |
| 4 | L | D | 0.2331 | |
| 5 | T | D | -0.4877 | |
| 6 | Q | D | 0.0000 | |
| 7 | S | D | -0.7602 | |
| 8 | P | D | -0.4536 | |
| 9 | A | D | -0.5203 | |
| 10 | T | D | -0.9328 | |
| 11 | L | D | -0.5115 | |
| 12 | S | D | -0.5712 | |
| 13 | L | D | -0.6125 | |
| 14 | S | D | -0.9826 | |
| 15 | P | D | -1.3743 | |
| 16 | G | D | -1.8727 | |
| 17 | E | D | -2.5461 | |
| 18 | R | D | -2.6648 | |
| 19 | A | D | 0.0000 | |
| 20 | T | D | -0.5656 | |
| 21 | L | D | 0.0000 | |
| 22 | S | D | -0.9300 | |
| 23 | C | D | 0.0000 | |
| 24 | R | D | -2.2739 | |
| 25 | A | D | 0.0000 | |
| 26 | S | D | -0.8726 | |
| 27 | Q | D | -1.1581 | |
| 28 | S | D | -0.6586 | |
| 29 | V | D | 0.0000 | |
| 30 | Y | D | 0.8996 | |
| 31 | S | D | 0.2736 | |
| 32 | Y | D | 0.5609 | |
| 33 | L | D | 0.0000 | |
| 34 | A | D | 0.0000 | |
| 35 | W | D | 0.0000 | |
| 36 | Y | D | 0.0000 | |
| 37 | Q | D | 0.0000 | |
| 38 | Q | D | 0.0000 | |
| 39 | K | D | -1.2779 | |
| 40 | P | D | -0.7803 | |
| 41 | G | D | -1.0469 | |
| 42 | Q | D | -1.2336 | |
| 43 | A | D | -0.8810 | |
| 44 | P | D | 0.0000 | |
| 45 | R | D | -1.1439 | |
| 46 | L | D | 0.0000 | |
| 47 | L | D | 0.0000 | |
| 48 | I | D | 0.0000 | |
| 49 | Y | D | -0.6438 | |
| 50 | D | D | -0.4862 | |
| 51 | A | D | 0.0000 | |
| 52 | S | D | -1.3146 | |
| 53 | N | D | -1.9478 | |
| 54 | R | D | -2.1434 | |
| 55 | A | D | -1.3128 | |
| 56 | T | D | -0.8398 | |
| 57 | G | D | -0.6098 | |
| 58 | I | D | -0.5348 | |
| 59 | P | D | -0.4022 | |
| 60 | A | D | -0.4171 | |
| 61 | R | D | -0.8162 | |
| 62 | F | D | 0.0000 | |
| 63 | S | D | -0.7663 | |
| 64 | G | D | -0.8646 | |
| 65 | S | D | -0.8799 | |
| 66 | G | D | -0.9993 | |
| 67 | S | D | -0.7025 | |
| 68 | G | D | -0.5152 | |
| 69 | T | D | -1.4041 | |
| 70 | D | D | -2.0654 | |
| 71 | F | D | 0.0000 | |
| 72 | T | D | -0.8260 | |
| 73 | L | D | 0.0000 | |
| 74 | T | D | -0.6034 | |
| 75 | I | D | 0.0000 | |
| 76 | S | D | -1.4134 | |
| 77 | S | D | -1.7877 | |
| 78 | L | D | 0.0000 | |
| 79 | E | D | -1.8982 | |
| 80 | P | D | -1.3458 | |
| 81 | E | D | -1.8816 | |
| 82 | D | D | 0.0000 | |
| 83 | F | D | -0.8328 | |
| 84 | A | D | 0.0000 | |
| 85 | V | D | 0.0000 | |
| 86 | Y | D | 0.0000 | |
| 87 | Y | D | 0.0000 | |
| 88 | C | D | 0.0000 | |
| 89 | Q | D | 0.0000 | |
| 90 | Q | D | 0.0000 | |
| 91 | R | D | 0.0000 | |
| 92 | S | D | 0.0000 | |
| 93 | N | D | -0.3131 | |
| 94 | W | D | 0.0932 | |
| 95 | P | D | -0.3127 | |
| 96 | P | D | -0.3571 | |
| 97 | F | D | 0.0000 | |
| 98 | T | D | 0.1164 | |
| 99 | F | D | 0.0000 | |
| 100 | G | D | 0.0000 | |
| 101 | P | D | -0.5677 | |
| 102 | G | D | -0.7951 | |
| 103 | T | D | 0.0000 | |
| 104 | K | D | -1.7625 | |
| 105 | V | D | 0.0000 | |
| 106 | D | D | -0.7848 | |
| 107 | I | D | 0.0704 | |
| 108 | K | D | -1.2051 | |
| 1 | Q | G | -1.0638 | |
| 2 | V | G | 0.1670 | |
| 3 | Q | G | -0.6358 | |
| 4 | L | G | 0.0000 | |
| 5 | V | G | 0.5892 | |
| 6 | E | G | 0.0000 | |
| 7 | S | G | -0.5753 | |
| 8 | G | G | -0.9713 | |
| 9 | G | G | -0.3803 | |
| 10 | G | G | 0.4763 | |
| 11 | V | G | 1.2918 | |
| 12 | V | G | 0.0000 | |
| 13 | Q | G | -1.7852 | |
| 14 | P | G | -1.9307 | |
| 15 | G | G | -2.3247 | |
| 16 | R | G | -2.9630 | |
| 17 | S | G | -2.1925 | |
| 18 | L | G | -1.4486 | |
| 19 | R | G | -1.9818 | |
| 20 | L | G | 0.0000 | |
| 21 | S | G | -0.4688 | |
| 22 | C | G | 0.0000 | |
| 23 | A | G | -0.2747 | |
| 24 | A | G | 0.0000 | |
| 25 | S | G | -0.0432 | |
| 26 | G | G | -0.0659 | |
| 27 | F | G | 0.9294 | |
| 28 | I | G | 1.9745 | |
| 29 | F | G | 0.0000 | |
| 30 | S | G | 0.1637 | |
| 31 | S | G | 0.1786 | |
| 32 | Y | G | 0.1771 | |
| 33 | A | G | 0.0000 | |
| 34 | M | G | 0.0000 | |
| 35 | H | G | 0.0000 | |
| 36 | W | G | 0.0000 | |
| 37 | V | G | 0.0000 | |
| 38 | R | G | 0.0000 | |
| 39 | Q | G | -0.7351 | |
| 40 | A | G | -1.0979 | |
| 41 | P | G | -0.8752 | |
| 42 | G | G | -1.2421 | |
| 43 | N | G | -1.7833 | |
| 44 | G | G | -1.1253 | |
| 45 | L | G | 0.0000 | |
| 46 | E | G | -0.9965 | |
| 47 | W | G | 0.0000 | |
| 48 | V | G | 0.0000 | |
| 49 | A | G | 0.0000 | |
| 50 | F | G | 0.0000 | |
| 51 | M | G | 0.0000 | |
| 52 | S | G | -0.8046 | |
| 53 | Y | G | -0.1680 | |
| 54 | D | G | -1.7537 | |
| 55 | G | G | -1.3977 | |
| 56 | S | G | -1.3340 | |
| 57 | N | G | -1.9066 | |
| 58 | K | G | -2.0377 | |
| 59 | K | G | -1.4083 | |
| 60 | Y | G | -1.2336 | |
| 61 | A | G | -1.4788 | |
| 62 | D | G | -2.4977 | |
| 63 | S | G | -1.7220 | |
| 64 | V | G | 0.0000 | |
| 65 | K | G | -2.6114 | |
| 66 | G | G | -1.8151 | |
| 67 | R | G | -1.6686 | |
| 68 | F | G | 0.0000 | |
| 69 | T | G | -1.1230 | |
| 70 | I | G | 0.0000 | |
| 71 | S | G | -0.7023 | |
| 72 | R | G | -1.0644 | |
| 73 | D | G | -1.7697 | |
| 74 | N | G | -1.6573 | |
| 75 | S | G | -1.6669 | |
| 76 | K | G | -2.3889 | |
| 77 | N | G | -1.4928 | |
| 78 | T | G | -1.0545 | |
| 79 | L | G | 0.0000 | |
| 80 | Y | G | -0.5505 | |
| 81 | L | G | 0.0000 | |
| 82 | Q | G | -1.4194 | |
| 83 | M | G | 0.0000 | |
| 84 | N | G | -2.4452 | |
| 85 | S | G | -2.0362 | |
| 86 | L | G | 0.0000 | |
| 87 | R | G | -2.4777 | |
| 88 | A | G | -1.6808 | |
| 89 | E | G | -2.1644 | |
| 90 | D | G | 0.0000 | |
| 91 | T | G | -0.6299 | |
| 92 | A | G | 0.0000 | |
| 93 | V | G | -0.0251 | |
| 94 | Y | G | 0.0000 | |
| 95 | Y | G | 0.0000 | |
| 96 | C | G | 0.0000 | |
| 97 | A | G | 0.0000 | |
| 98 | R | G | -0.7775 | |
| 99 | D | G | 0.0000 | |
| 100 | R | G | -1.2766 | |
| 101 | G | G | -0.0340 | |
| 102 | I | G | 0.8254 | |
| 103 | A | G | 0.3798 | |
| 104 | A | G | 0.0327 | |
| 105 | G | G | -0.5059 | |
| 106 | G | G | -0.6018 | |
| 107 | N | G | -0.4833 | |
| 108 | Y | G | 0.4131 | |
| 109 | Y | G | 0.0000 | |
| 110 | Y | G | 0.7170 | |
| 111 | Y | G | 0.0699 | |
| 112 | G | G | 0.0000 | |
| 113 | M | G | 0.0000 | |
| 114 | D | G | -1.2525 | |
| 115 | V | G | -0.3157 | |
| 116 | W | G | -0.3782 | |
| 117 | G | G | 0.0000 | |
| 118 | Q | G | -1.1722 | |
| 119 | G | G | -0.4798 | |
| 120 | T | G | -0.3239 | |
| 121 | T | G | -0.0664 | |
| 122 | V | G | 0.0000 | |
| 123 | T | G | -0.0042 | |
| 124 | V | G | 0.0000 | |
| 125 | S | G | -0.3831 | |
| 126 | S | G | -0.5109 |