| Chain sequence(s) |
A: GPPGLNPEPALVSTDEYVKPTDLLYIAETDLLTEEGNPFKDIVVNGKVVVPRVSAYDYKVFKLTLPDPNTLPLPSDDFIDKSTEILIWRLLAYEIKIFGPLGVGTVGHKNFNKLGDVDNPTSYQHSTADDTVDFSFTPIYKQEYIIGDEPPTGKYIDPAPPEPGLPPGAPPPTKTVTTTIEHGDVADIGFGSKDFAKLDPDKDNVPDLILNTKTVEFDYEGMEAEPTGRKMFDYFKKTKSKAVKNLVRDGPDLFPLPSAPGPSPLYVPPPPTSPYAVLPPYDYFTIPDRGEITEEDLLFNKPYFFEKAKGKNNFILWHNQLYITILDNSRDEIETIEVKKSTPLPNVFDPSNYVTSKRYKREYQLSLIVQLCKIPLTPEVLELLSRIDPRILVEANLPFVPPVERPDPYAGKKFIEIDLTDKLSSDLEKYELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7439 | |
| 2 | P | A | -0.4783 | |
| 3 | P | A | -0.4945 | |
| 4 | G | A | -0.4372 | |
| 5 | L | A | 0.1938 | |
| 6 | N | A | -1.3705 | |
| 7 | P | A | -1.3819 | |
| 8 | E | A | -2.1224 | |
| 9 | P | A | -1.1857 | |
| 10 | A | A | -0.3271 | |
| 11 | L | A | -0.0679 | |
| 12 | V | A | -0.1717 | |
| 13 | S | A | -1.2889 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.1230 | |
| 16 | E | A | -2.8528 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | K | A | -2.5317 | |
| 20 | P | A | -1.7783 | |
| 21 | T | A | -1.3052 | |
| 22 | D | A | -1.6359 | |
| 23 | L | A | -0.5029 | |
| 24 | L | A | -0.1651 | |
| 25 | Y | A | -0.1328 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.9911 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3900 | |
| 31 | L | A | 0.3450 | |
| 32 | L | A | 0.2007 | |
| 33 | T | A | -0.5959 | |
| 34 | E | A | -1.4392 | |
| 35 | E | A | -2.2651 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.9134 | |
| 40 | K | A | -1.8707 | |
| 41 | D | A | -0.6926 | |
| 42 | I | A | 1.3587 | |
| 43 | V | A | 2.2605 | |
| 44 | V | A | 1.7119 | |
| 45 | N | A | -0.5125 | |
| 46 | G | A | -0.3441 | |
| 47 | K | A | -0.0968 | |
| 48 | V | A | 1.9842 | |
| 49 | V | A | 2.5568 | |
| 50 | V | A | 0.9784 | |
| 51 | P | A | -0.2998 | |
| 52 | R | A | -1.2528 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.2480 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2786 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.0085 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.9679 | |
| 70 | T | A | -0.3532 | |
| 71 | L | A | -0.0785 | |
| 72 | P | A | -0.2965 | |
| 73 | L | A | -0.4213 | |
| 74 | P | A | -0.6861 | |
| 75 | S | A | -1.5348 | |
| 76 | D | A | -2.8458 | |
| 77 | D | A | -3.0776 | |
| 78 | F | A | -1.6781 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -3.1549 | |
| 81 | K | A | -2.8835 | |
| 82 | S | A | -1.6657 | |
| 83 | T | A | -1.3178 | |
| 84 | E | A | -1.4786 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3556 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | E | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.6663 | |
| 97 | I | A | 0.0000 | |
| 98 | F | A | 0.3304 | |
| 99 | G | A | -0.5160 | |
| 100 | P | A | -0.3252 | |
| 101 | L | A | 0.1945 | |
| 102 | G | A | 0.0000 | |
| 103 | V | A | 1.2515 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | 0.1090 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -1.1611 | |
| 108 | H | A | 0.0000 | |
| 109 | K | A | -2.8752 | |
| 110 | N | A | -2.6144 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.7097 | |
| 113 | K | A | -0.8516 | |
| 114 | L | A | -0.6219 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2172 | |
| 117 | V | A | -0.7687 | |
| 118 | D | A | -2.0632 | |
| 119 | N | A | -2.1730 | |
| 120 | P | A | -1.1616 | |
| 121 | T | A | -0.7342 | |
| 122 | S | A | -0.4013 | |
| 123 | Y | A | 0.5011 | |
| 124 | Q | A | 0.0542 | |
| 125 | H | A | -0.1727 | |
| 126 | S | A | -0.7331 | |
| 127 | T | A | -1.0036 | |
| 128 | A | A | -0.9880 | |
| 129 | D | A | -2.0177 | |
| 130 | D | A | -1.2457 | |
| 131 | T | A | -1.4490 | |
| 132 | V | A | -1.1723 | |
| 133 | D | A | -2.4115 | |
| 134 | F | A | -1.1729 | |
| 135 | S | A | -0.7951 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | 0.2658 | |
| 138 | P | A | 0.0000 | |
| 139 | I | A | 0.0000 | |
| 140 | Y | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.4018 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.4229 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.5047 | |
| 155 | Y | A | -0.4803 | |
| 156 | I | A | -0.0815 | |
| 157 | D | A | -0.7988 | |
| 158 | P | A | -0.8622 | |
| 159 | A | A | -0.8452 | |
| 160 | P | A | -1.0696 | |
| 161 | P | A | -1.3176 | |
| 162 | E | A | -2.0439 | |
| 163 | P | A | -1.2164 | |
| 164 | G | A | -0.6818 | |
| 165 | L | A | -0.0758 | |
| 166 | P | A | -0.0901 | |
| 167 | P | A | -0.3497 | |
| 168 | G | A | -0.4423 | |
| 169 | A | A | 0.1148 | |
| 170 | P | A | -0.2438 | |
| 171 | P | A | -0.9244 | |
| 172 | P | A | -0.7810 | |
| 173 | T | A | -0.6647 | |
| 174 | K | A | -1.0307 | |
| 175 | T | A | -0.3745 | |
| 176 | V | A | -0.0552 | |
| 177 | T | A | -0.2274 | |
| 178 | T | A | -0.2065 | |
| 179 | T | A | -0.5640 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2160 | |
| 182 | H | A | -1.0077 | |
| 183 | G | A | -0.7559 | |
| 184 | D | A | -0.9575 | |
| 185 | V | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.6726 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4142 | |
| 190 | F | A | -0.0735 | |
| 191 | G | A | -0.4456 | |
| 192 | S | A | -0.6753 | |
| 193 | K | A | -0.9995 | |
| 194 | D | A | -1.2076 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -2.0192 | |
| 197 | K | A | -2.2999 | |
| 198 | L | A | -1.3398 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.9153 | |
| 201 | D | A | -2.2159 | |
| 202 | K | A | -3.0901 | |
| 203 | D | A | -2.2752 | |
| 204 | N | A | -1.3937 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.7955 | |
| 208 | L | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.1395 | |
| 211 | N | A | -2.0185 | |
| 212 | T | A | -1.3328 | |
| 213 | K | A | -1.3675 | |
| 214 | T | A | 0.0000 | |
| 215 | V | A | 0.0000 | |
| 216 | E | A | -1.0815 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | -1.2812 | |
| 219 | Y | A | -1.5645 | |
| 220 | E | A | -2.5793 | |
| 221 | G | A | -1.8880 | |
| 222 | M | A | 0.0000 | |
| 223 | E | A | -3.0035 | |
| 224 | A | A | -1.6463 | |
| 225 | E | A | -1.5578 | |
| 226 | P | A | -0.8265 | |
| 227 | T | A | -0.7876 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | K | A | -0.7676 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.6030 | |
| 234 | Y | A | 0.1561 | |
| 235 | F | A | 0.2082 | |
| 236 | K | A | -0.9891 | |
| 237 | K | A | -0.9836 | |
| 238 | T | A | -0.8324 | |
| 239 | K | A | -1.3505 | |
| 240 | S | A | -1.4785 | |
| 241 | K | A | -1.9397 | |
| 242 | A | A | -0.6319 | |
| 243 | V | A | 0.0136 | |
| 244 | K | A | -1.1583 | |
| 245 | N | A | -0.8951 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6786 | |
| 249 | D | A | -1.1206 | |
| 250 | G | A | -0.8398 | |
| 251 | P | A | -0.2943 | |
| 252 | D | A | 0.2400 | |
| 253 | L | A | 1.2171 | |
| 254 | F | A | 2.1323 | |
| 255 | P | A | 0.9033 | |
| 256 | L | A | 1.0863 | |
| 257 | P | A | 0.3266 | |
| 258 | S | A | -0.2849 | |
| 259 | A | A | -0.2976 | |
| 260 | P | A | -0.5350 | |
| 261 | G | A | -0.4620 | |
| 262 | P | A | 0.0705 | |
| 263 | S | A | 0.5953 | |
| 264 | P | A | 0.7507 | |
| 265 | L | A | 1.8853 | |
| 266 | Y | A | 1.7545 | |
| 267 | V | A | 1.9161 | |
| 268 | P | A | 1.0305 | |
| 269 | P | A | 0.6463 | |
| 270 | P | A | 0.0268 | |
| 271 | P | A | -0.0959 | |
| 272 | T | A | -0.1943 | |
| 273 | S | A | 0.2523 | |
| 274 | P | A | 0.6068 | |
| 275 | Y | A | 1.4955 | |
| 276 | A | A | 1.2318 | |
| 277 | V | A | 2.1400 | |
| 278 | L | A | 1.6095 | |
| 279 | P | A | 0.5691 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.3402 | |
| 282 | D | A | -0.1967 | |
| 283 | Y | A | 0.9026 | |
| 284 | F | A | 0.3765 | |
| 285 | T | A | -0.1993 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.0235 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.2543 | |
| 291 | E | A | -1.8790 | |
| 292 | I | A | -1.1499 | |
| 293 | T | A | -1.8095 | |
| 294 | E | A | -2.6657 | |
| 295 | E | A | -2.7877 | |
| 296 | D | A | -1.9551 | |
| 297 | L | A | -1.3931 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3988 | |
| 301 | K | A | -1.8081 | |
| 302 | P | A | -0.7308 | |
| 303 | Y | A | -0.0463 | |
| 304 | F | A | -0.0443 | |
| 305 | F | A | -0.8766 | |
| 306 | E | A | -2.4034 | |
| 307 | K | A | -3.2416 | |
| 308 | A | A | 0.0000 | |
| 309 | K | A | -2.7493 | |
| 310 | G | A | -2.3731 | |
| 311 | K | A | -2.1486 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | F | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7178 | |
| 319 | N | A | -0.7060 | |
| 320 | Q | A | -0.6810 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | D | A | 0.0000 | |
| 332 | E | A | -1.3773 | |
| 333 | I | A | -1.2122 | |
| 334 | E | A | -2.1824 | |
| 335 | T | A | -0.9482 | |
| 336 | I | A | 0.2475 | |
| 337 | E | A | -0.6951 | |
| 338 | V | A | 0.2412 | |
| 339 | K | A | -1.8584 | |
| 340 | K | A | -2.1625 | |
| 341 | S | A | -1.3355 | |
| 342 | T | A | -0.9036 | |
| 343 | P | A | -0.7548 | |
| 344 | L | A | -0.2539 | |
| 345 | P | A | 0.0932 | |
| 346 | N | A | -0.1128 | |
| 347 | V | A | 1.8339 | |
| 348 | F | A | 2.0076 | |
| 349 | D | A | 0.1869 | |
| 350 | P | A | -0.3116 | |
| 351 | S | A | -0.6667 | |
| 352 | N | A | -0.7915 | |
| 353 | Y | A | -0.4299 | |
| 354 | V | A | 0.3721 | |
| 355 | T | A | 0.1459 | |
| 356 | S | A | -0.2591 | |
| 357 | K | A | -1.3195 | |
| 358 | R | A | -1.7202 | |
| 359 | Y | A | 0.0000 | |
| 360 | K | A | -2.3411 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.3827 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.3787 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.4167 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -1.2210 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -1.0229 | |
| 376 | L | A | -0.7444 | |
| 377 | T | A | -0.9162 | |
| 378 | P | A | -1.5086 | |
| 379 | E | A | -2.4308 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -1.3582 | |
| 382 | E | A | -2.5086 | |
| 383 | L | A | -1.3339 | |
| 384 | L | A | 0.0000 | |
| 385 | S | A | -0.9717 | |
| 386 | R | A | -1.1932 | |
| 387 | I | A | -0.4711 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -0.7850 | |
| 390 | R | A | -1.1070 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -0.5074 | |
| 393 | V | A | -0.8062 | |
| 394 | E | A | -2.2020 | |
| 395 | A | A | -1.3948 | |
| 396 | N | A | -1.4822 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.3930 | |
| 399 | F | A | 1.7311 | |
| 400 | V | A | 0.9136 | |
| 401 | P | A | 0.4203 | |
| 402 | P | A | -0.2291 | |
| 403 | V | A | 0.4170 | |
| 404 | E | A | -1.9587 | |
| 405 | R | A | -2.1877 | |
| 406 | P | A | -1.6138 | |
| 407 | D | A | -1.6806 | |
| 408 | P | A | -1.0134 | |
| 409 | Y | A | -0.9250 | |
| 410 | A | A | -1.0155 | |
| 411 | G | A | -1.3159 | |
| 412 | K | A | -1.8466 | |
| 413 | K | A | -2.4737 | |
| 414 | F | A | -1.4324 | |
| 415 | I | A | -1.1188 | |
| 416 | E | A | -2.3327 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.7456 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8314 | |
| 421 | D | A | -2.5759 | |
| 422 | K | A | -2.4137 | |
| 423 | L | A | -0.9755 | |
| 424 | S | A | -1.1270 | |
| 425 | S | A | -0.7899 | |
| 426 | D | A | -1.8916 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.1919 | |
| 429 | K | A | -3.2175 | |
| 430 | Y | A | -2.1948 | |
| 431 | E | A | -2.1030 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3799 | |
| 435 | L | A | -0.7130 | |
| 436 | Y | A | -0.4228 | |
| 437 | L | A | -0.3563 | |
| 438 | N | A | -1.5847 | |
| 439 | R | A | -1.9303 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine