Project name: query_structure

Status: done

Started: 2026-03-16 23:00:06
Settings
Chain sequence(s) A: CKGKGAPCRKTMYDCCKGRCGRRGRC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:26)
Show buried residues

Minimal score value
-3.9859
Maximal score value
0.1677
Average score
-1.9577
Total score value
-50.9004

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.1677
2 K A -1.6552
3 G A -1.9818
4 K A -2.9269
5 G A -1.9116
6 A A -1.6773
7 P A -2.4164
8 C A 0.0000
9 R A -2.9656
10 K A -3.1819
11 T A -0.8339
12 M A 0.1642
13 Y A 0.0182
14 D A -0.5435
15 C A 0.0000
16 C A -0.7625
17 K A -2.3875
18 G A -1.9628
19 R A -2.5974
20 C A -2.8081
21 G A -2.9543
22 R A -3.6132
23 R A -3.5570
24 G A -3.2879
25 R A -3.9859
26 C A -3.2398
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Laboratory of Theory of Biopolymers 2018