| Chain sequence(s) |
A: CKGKGAPCRKTMYDCCKGRCGRRGRC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.1677 | |
| 2 | K | A | -1.6552 | |
| 3 | G | A | -1.9818 | |
| 4 | K | A | -2.9269 | |
| 5 | G | A | -1.9116 | |
| 6 | A | A | -1.6773 | |
| 7 | P | A | -2.4164 | |
| 8 | C | A | 0.0000 | |
| 9 | R | A | -2.9656 | |
| 10 | K | A | -3.1819 | |
| 11 | T | A | -0.8339 | |
| 12 | M | A | 0.1642 | |
| 13 | Y | A | 0.0182 | |
| 14 | D | A | -0.5435 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | -0.7625 | |
| 17 | K | A | -2.3875 | |
| 18 | G | A | -1.9628 | |
| 19 | R | A | -2.5974 | |
| 20 | C | A | -2.8081 | |
| 21 | G | A | -2.9543 | |
| 22 | R | A | -3.6132 | |
| 23 | R | A | -3.5570 | |
| 24 | G | A | -3.2879 | |
| 25 | R | A | -3.9859 | |
| 26 | C | A | -3.2398 |