| Chain sequence(s) |
A: ETVIMKYLLPTAAAGLLLLAAQPAMAQVKLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSVSYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKRAAAEQKLISEEDLN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:51)
[INFO] Main: Simulation completed successfully. (00:03:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.2093 | |
| 2 | T | A | 0.5301 | |
| 3 | V | A | 2.3452 | |
| 4 | I | A | 2.8855 | |
| 5 | M | A | 2.1596 | |
| 6 | K | A | 0.7211 | |
| 7 | Y | A | 2.0971 | |
| 8 | L | A | 2.5444 | |
| 9 | L | A | 2.3080 | |
| 10 | P | A | 0.9998 | |
| 11 | T | A | 0.4254 | |
| 12 | A | A | 0.1332 | |
| 13 | A | A | 0.1301 | |
| 14 | A | A | 0.4827 | |
| 15 | G | A | 0.9605 | |
| 16 | L | A | 2.7209 | |
| 17 | L | A | 3.3798 | |
| 18 | L | A | 3.4589 | |
| 19 | L | A | 2.8161 | |
| 20 | A | A | 1.1377 | |
| 21 | A | A | 0.1106 | |
| 22 | Q | A | -0.8695 | |
| 23 | P | A | -0.4680 | |
| 24 | A | A | -0.0570 | |
| 25 | M | A | 0.4990 | |
| 26 | A | A | -0.2553 | |
| 27 | Q | A | -1.2071 | |
| 28 | V | A | -1.0051 | |
| 29 | K | A | -2.0351 | |
| 30 | L | A | 0.0000 | |
| 31 | Q | A | -1.9559 | |
| 32 | Q | A | 0.0000 | |
| 33 | S | A | -1.1350 | |
| 34 | G | A | -1.1681 | |
| 35 | A | A | -0.9461 | |
| 36 | E | A | -1.1436 | |
| 37 | L | A | 0.2800 | |
| 38 | V | A | -0.5259 | |
| 39 | R | A | -1.8472 | |
| 40 | S | A | -1.6465 | |
| 41 | G | A | -1.2426 | |
| 42 | T | A | -0.9193 | |
| 43 | S | A | -1.0901 | |
| 44 | V | A | 0.0000 | |
| 45 | K | A | -1.8839 | |
| 46 | L | A | 0.0000 | |
| 47 | S | A | -0.7054 | |
| 48 | C | A | 0.0000 | |
| 49 | T | A | -0.8932 | |
| 50 | A | A | 0.0000 | |
| 51 | S | A | -1.3495 | |
| 52 | G | A | -0.9006 | |
| 53 | F | A | -1.1278 | |
| 54 | N | A | -1.8438 | |
| 55 | I | A | 0.0000 | |
| 56 | K | A | -2.5398 | |
| 57 | D | A | -2.6130 | |
| 58 | S | A | 0.0000 | |
| 59 | Y | A | -0.7052 | |
| 60 | M | A | 0.0000 | |
| 61 | H | A | 0.0000 | |
| 62 | W | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | R | A | 0.0000 | |
| 65 | Q | A | -0.8152 | |
| 66 | G | A | 0.0000 | |
| 67 | P | A | -1.6892 | |
| 68 | E | A | -2.5495 | |
| 69 | Q | A | -2.2701 | |
| 70 | G | A | -1.1567 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | -0.5604 | |
| 73 | W | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | W | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | D | A | 0.0000 | |
| 79 | P | A | 0.0000 | |
| 80 | E | A | -3.3136 | |
| 81 | N | A | -2.9704 | |
| 82 | G | A | -2.4555 | |
| 83 | D | A | -2.8276 | |
| 84 | T | A | -1.4616 | |
| 85 | E | A | -1.1200 | |
| 86 | Y | A | -0.8092 | |
| 87 | A | A | 0.0000 | |
| 88 | P | A | -1.9664 | |
| 89 | K | A | -2.4846 | |
| 90 | F | A | 0.0000 | |
| 91 | Q | A | -2.1336 | |
| 92 | G | A | -1.4855 | |
| 93 | K | A | -1.3957 | |
| 94 | A | A | 0.0000 | |
| 95 | T | A | -0.8380 | |
| 96 | F | A | 0.0000 | |
| 97 | T | A | -0.5118 | |
| 98 | T | A | -0.7561 | |
| 99 | D | A | -0.8456 | |
| 100 | T | A | -1.1666 | |
| 101 | S | A | -0.7132 | |
| 102 | S | A | -0.7348 | |
| 103 | N | A | -0.9089 | |
| 104 | T | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | Y | A | -0.4577 | |
| 107 | L | A | 0.0000 | |
| 108 | Q | A | -1.3300 | |
| 109 | L | A | 0.0000 | |
| 110 | S | A | -0.9016 | |
| 111 | S | A | -0.8478 | |
| 112 | L | A | 0.0000 | |
| 113 | T | A | -1.4368 | |
| 114 | S | A | -1.4969 | |
| 115 | E | A | -1.9720 | |
| 116 | D | A | 0.0000 | |
| 117 | T | A | -0.6666 | |
| 118 | A | A | 0.0000 | |
| 119 | V | A | -0.0080 | |
| 120 | Y | A | 0.0000 | |
| 121 | Y | A | 0.0000 | |
| 122 | C | A | 0.0000 | |
| 123 | N | A | 0.0000 | |
| 124 | E | A | 0.0000 | |
| 125 | G | A | 0.0000 | |
| 126 | T | A | -0.2419 | |
| 127 | P | A | -0.3393 | |
| 128 | T | A | -0.3767 | |
| 129 | G | A | -0.2144 | |
| 130 | P | A | 0.1926 | |
| 131 | Y | A | 0.6508 | |
| 132 | Y | A | 0.6809 | |
| 133 | F | A | 0.0000 | |
| 134 | D | A | -0.1713 | |
| 135 | Y | A | -0.1870 | |
| 136 | W | A | -0.6686 | |
| 137 | G | A | 0.0000 | |
| 138 | Q | A | -1.6439 | |
| 139 | G | A | -0.8581 | |
| 140 | T | A | 0.0000 | |
| 141 | T | A | -0.4550 | |
| 142 | V | A | 0.0000 | |
| 143 | T | A | -0.4610 | |
| 144 | V | A | 0.0000 | |
| 145 | S | A | -0.7497 | |
| 146 | S | A | -1.1972 | |
| 147 | G | A | -1.3688 | |
| 148 | G | A | -1.2020 | |
| 149 | G | A | -1.1114 | |
| 150 | G | A | -1.2116 | |
| 151 | S | A | -0.9969 | |
| 152 | G | A | -1.1751 | |
| 153 | G | A | -1.2017 | |
| 154 | G | A | -1.2045 | |
| 155 | G | A | -1.4399 | |
| 156 | S | A | -1.2312 | |
| 157 | G | A | -1.5576 | |
| 158 | G | A | -1.4734 | |
| 159 | G | A | -1.4698 | |
| 160 | G | A | -1.5524 | |
| 161 | S | A | -1.3161 | |
| 162 | E | A | -1.6865 | |
| 163 | N | A | -0.5483 | |
| 164 | V | A | 0.6948 | |
| 165 | L | A | 0.0000 | |
| 166 | T | A | 0.1412 | |
| 167 | Q | A | 0.0000 | |
| 168 | S | A | -0.0103 | |
| 169 | P | A | 0.3186 | |
| 170 | A | A | 0.6651 | |
| 171 | I | A | 1.3404 | |
| 172 | M | A | 0.2590 | |
| 173 | S | A | -0.9388 | |
| 174 | A | A | 0.0000 | |
| 175 | S | A | -2.1323 | |
| 176 | P | A | -2.0886 | |
| 177 | G | A | -2.4219 | |
| 178 | E | A | -3.2101 | |
| 179 | K | A | -3.3386 | |
| 180 | V | A | 0.0000 | |
| 181 | T | A | -0.4797 | |
| 182 | I | A | 0.0000 | |
| 183 | T | A | -0.2713 | |
| 184 | C | A | 0.0000 | |
| 185 | S | A | -0.2472 | |
| 186 | A | A | 0.0000 | |
| 187 | S | A | -0.3130 | |
| 188 | S | A | -0.5538 | |
| 189 | S | A | -0.5231 | |
| 190 | V | A | 0.0000 | |
| 191 | S | A | -0.1233 | |
| 192 | Y | A | 0.5039 | |
| 193 | M | A | 0.0000 | |
| 194 | H | A | 0.0000 | |
| 195 | W | A | 0.0000 | |
| 196 | F | A | 0.0000 | |
| 197 | Q | A | 0.0000 | |
| 198 | Q | A | 0.0000 | |
| 199 | K | A | -1.4861 | |
| 200 | P | A | -0.8681 | |
| 201 | G | A | -0.9687 | |
| 202 | T | A | -1.0084 | |
| 203 | S | A | -0.8209 | |
| 204 | P | A | 0.0000 | |
| 205 | K | A | -1.0984 | |
| 206 | L | A | 0.0000 | |
| 207 | W | A | -0.1873 | |
| 208 | I | A | 0.0000 | |
| 209 | Y | A | 0.4874 | |
| 210 | S | A | 0.2360 | |
| 211 | T | A | -0.1576 | |
| 212 | S | A | -0.4630 | |
| 213 | N | A | -0.6090 | |
| 214 | L | A | 0.0524 | |
| 215 | A | A | 0.0000 | |
| 216 | S | A | -0.4070 | |
| 217 | G | A | -0.4013 | |
| 218 | V | A | -0.1447 | |
| 219 | P | A | -0.2015 | |
| 220 | A | A | -0.1962 | |
| 221 | R | A | -1.3359 | |
| 222 | F | A | 0.0000 | |
| 223 | S | A | -0.4087 | |
| 224 | G | A | 0.0000 | |
| 225 | S | A | -0.6720 | |
| 226 | G | A | -0.6650 | |
| 227 | S | A | -0.5736 | |
| 228 | G | A | -0.5565 | |
| 229 | T | A | -0.6055 | |
| 230 | S | A | -0.6251 | |
| 231 | Y | A | 0.0000 | |
| 232 | S | A | -0.3737 | |
| 233 | L | A | 0.0000 | |
| 234 | T | A | -0.8058 | |
| 235 | I | A | 0.0000 | |
| 236 | S | A | -2.2746 | |
| 237 | R | A | -3.4956 | |
| 238 | M | A | 0.0000 | |
| 239 | E | A | -2.5704 | |
| 240 | A | A | -1.6314 | |
| 241 | E | A | -2.2956 | |
| 242 | D | A | 0.0000 | |
| 243 | A | A | -1.5418 | |
| 244 | A | A | 0.0000 | |
| 245 | T | A | -0.6218 | |
| 246 | Y | A | 0.0000 | |
| 247 | Y | A | 0.0000 | |
| 248 | C | A | 0.0000 | |
| 249 | Q | A | 0.0000 | |
| 250 | Q | A | 0.0000 | |
| 251 | R | A | 0.1002 | |
| 252 | S | A | -0.1171 | |
| 253 | S | A | -0.3048 | |
| 254 | Y | A | 0.0764 | |
| 255 | P | A | -0.2414 | |
| 256 | L | A | 0.0000 | |
| 257 | T | A | 0.0481 | |
| 258 | F | A | 0.2934 | |
| 259 | G | A | 0.0000 | |
| 260 | A | A | -0.5996 | |
| 261 | G | A | 0.0000 | |
| 262 | T | A | 0.0000 | |
| 263 | K | A | -0.7455 | |
| 264 | L | A | 0.0000 | |
| 265 | E | A | -1.7354 | |
| 266 | L | A | -1.5224 | |
| 267 | K | A | -2.5664 | |
| 268 | R | A | -2.5888 | |
| 269 | A | A | -1.4279 | |
| 270 | A | A | -1.3701 | |
| 271 | A | A | -1.7019 | |
| 272 | E | A | -2.6733 | |
| 273 | Q | A | -2.1323 | |
| 274 | K | A | -1.5529 | |
| 275 | L | A | 0.7510 | |
| 276 | I | A | 1.0727 | |
| 277 | S | A | -0.6944 | |
| 278 | E | A | -2.3782 | |
| 279 | E | A | -3.1176 | |
| 280 | D | A | -2.4878 | |
| 281 | L | A | -0.7728 | |
| 282 | N | A | -1.7399 |